Publikasjoner
NIBIOs ansatte publiserer flere hundre vitenskapelige artikler og forskningsrapporter hvert år. Her finner du referanser og lenker til publikasjoner og andre forsknings- og formidlingsaktiviteter. Samlingen oppdateres løpende med både nytt og historisk materiale. For mer informasjon om NIBIOs publikasjoner, besøk NIBIOs bibliotek.
2018
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Marian Pavelka Manuel Acosta Ralf Kiese Núria Altimir Christian Brümmer Patrick Crill Eva Darenova Roland Fuß Bert Gielen Alexander Graf Leif Klemedtsson Annalea Lohila Bernhard Longdoz Anders Lindroth Mats Nilsson Sara Maraňón Jiménez Lutz Merbold Leonardo Montagnani Matthias Peichl Mari Pihlatie Jukka Pumpanen Penelope Serrano Ortiz Hanna Marika Silvennoinen Ute Skiba Patrik Vestin Per Weslien Dalibor Janous Werner KutschSammendrag
Chamber measurements of trace gas fluxes between the land surface and the atmosphere have been conducted for almost a century. Different chamber techniques, including static and dynamic, have been used with varying degrees of success in estimating greenhouse gases (CO2, CH4, N2O) fluxes. However, all of these have certain disadvantages which have either prevented them from providing an adequate estimate of greenhouse gas exchange or restricted them to be used under limited conditions. Generally, chamber methods are relatively low in cost and simple to operate. In combination with the appropriate sample allocations, chamber methods are adaptable for a wide variety of studies from local to global spatial scales, and they are particularly well suited for in situ and laboratory-based studies. Consequently, chamber measurements will play an important role in the portfolio of the Pan-European long-term research infrastructure Integrated Carbon Observation System. The respective working group of the Integrated Carbon Observation System Ecosystem Monitoring Station Assembly has decided to ascertain standards and quality checks for automated and manual chamber systems instead of defining one or several standard systems provided by commercial manufacturers in order to define minimum requirements for chamber measurements. The defined requirements and recommendations related to chamber measurements are described here.
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Daniela Franz Manuel Acosta Nuria Altimir Nicola Arriga Dominique Arrouays Marc Aubinet Mika Aurela Edward Ayres Ana López-Ballesteros Mireille Barbaste Daniel Berveiller Sébastien Biraud Hakima Boukir Timothy Brown Christian Brümmer Nina Buchmann George Burba Arnaud Carrara Allessandro Cescatti Eric Ceschia Robert Clement Edoardo Cremonese Patrick Crill Eva Darenova Sigrid Dengel Petra D'Odorico Gianluca Filippa Stefan Fleck Gerardo Fratini Roland Fuß Bert Gielen Sébastien Gogo John Grace Alexander Graf Achim Grelle Patrick Gross Thomas Grünwald Sami Haapanala Markus Hehn Bernard Heinesch Jouni Heiskanen Mathias Herbst Christine Herschlein Lukas Hörtnagl Koen Hufkens Andreas Ibrom Claudy Jolivet Lilian Joly Michael Jones Ralf Kiese Leif Klemedtsson Natascha Kljun Katja Klumpp Pasi Kolari Olaf Kolle Andrew Kowalski Werner Kutsch Tuomas Laurila Anne de Ligne Sune Linder Anders Lindroth Annalea Lohila Bernhard Longdoz Ivan Mammarella Tanguy Manise Sara Maraňón Jiménez Giorgio Matteucci Matthias Mauder Philip Meier Lutz Merbold Simone Mereu Stefan Metzger Mirco Migliavacca Meelis Mölder Leonardo Montagnani Christine Moureaux David Nelson Eiko Nemitz Giacomo Nicolini Mats B. Nilsson Maarten op de Beeck Bruce Osborne Mikaell Ottosson Löfvenius Marian Pavelka Matthias Peichl Olli Peltola Mari Pihlatie Andrea Pitacco Radek Pokorny Jukka Pumpanen Céline Ratié Corinna Rebmann Marilyn Roland Simone Sabbatini Nicolas P.A. Saby Matthew Saunders Hans Peter Schmid Marion Schrumpf Pavel Sedlák Penelope Serrano Ortiz Lukas Siebicke Ladislav Šigut Hanna Marika Silvennoinen Guillaume Simioni Ute Skiba Oliver Sonnentag Kamel Soudani Patrice Soulé Rainer Steinbrecher Tiphaine Tallec Anne Thimonier Eeva-Stiina Tuittila Juha-Pekka Tuovinen Patrik Vestin Gaëlle Vincent Caroline Vincke Domenico Vitale Peter Waldner Per Weslien Lisa Wingate Georg Wohlfahrt Mark Zahniser Timo VesalaSammendrag
Research infrastructures play a key role in launching a new generation of integrated long-term, geographically distributed observation programmes designed to monitor climate change, better understand its impacts on global ecosystems, and evaluate possible mitigation and adaptation strategies. The pan-European Integrated Carbon Observation System combines carbon and greenhouse gas (GHG; CO2, CH4, N2O, H2O) observations within the atmosphere, terrestrial ecosystems and oceans. High-precision measurements are obtained using standardised methodologies, are centrally processed and openly available in a traceable and verifiable fashion in combination with detailed metadata. The Integrated Carbon Observation System ecosystem station network aims to sample climate and land-cover variability across Europe. In addition to GHG flux measurements, a large set of complementary data (including management practices, vegetation and soil characteristics) is collected to support the interpretation, spatial upscaling and modelling of observed ecosystem carbon and GHG dynamics. The applied sampling design was developed and formulated in protocols by the scientific community, representing a trade-off between an ideal dataset and practical feasibility. The use of open-access, high-quality and multi-level data products by different user communities is crucial for the Integrated Carbon Observation System in order to achieve its scientific potential and societal value.
Forfattere
Eivind Vangdal Angela KoortSammendrag
The major sources of nutrients to organic grown apple trees are fertilizers made from manure, compost, bone meal, etc. Depending on humidity and temperature in soil and air, the nutrients are dissolved or mineralized and made available to the trees during the growing season. In conventional apple growing, the trees are given mineral fertilizers in early spring to improve the nitrogen status in the trees during flowering for better fruit set. Is it possible in an organic production system to increase the plant available nitrogen in the flowering period by application of liquid N-fertilizers? The standard fertilizer in Norwegian organic fruit growing is dried and pelleted chicken manure with bone meal and vinasse (Marihøne plus; NPK 8-4-5). In these experiments, a liquid fertilizer (Pioner Hi-fruit; NPK 4-1-5) based on vegetable matter plus potassium-vinasse was compared to the standard fertilizer. The liquid fertilizer was applied to the soil as fertigation from 2 weeks before the estimated start of flowering. The dry product was applied 2 weeks prior to flowering. To incorporate the fertilizers into the soil, a mechanical hoer (Orizzonti, Italy) was run in all plots after the application of dry fertilizer. The nitrogen and mineral contents in soil, leaves and fruit were analyzed. The liquid fertilization applied on the soil in the spring gave higher N-contents in soil and trees compared to the dried manure product. However, the increase in N-content was not very strong in the leaf samples. Apples from trees given high doses of liquid fertilizers were greener with less cover colour and higher IAD-indexes. Still they were softer and had less starch than fruit from other treatments.
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This research note offers a critical-constructive discussion of the article ‘Class, Culture and Culinary Tastes: Cultural Distinctions and Social Class Divisions in Contemporary Norway’, written by Flemmen, Hjellbrekke and Jarness (FHJ) (Sociology, 2018(1)). Concerns are raised about the methods and the use of the data. A robustness analysis with alternative data and/or alternative methods is suggested. Conceptually, the analysis of FHJ is considered not to engage adequately with a more qualitative body of historical and ethnological literature, as well as the impact of Norwegian agricultural policy. To describe and understand the evolution of social meaning and social patterns of the consumption of ‘traditional’ Norwegian foodstuffs, a qualitative approach could have contributed constructively. Overall, wider implications for Bourdieu-inspired analyses of cultural consumption are addressed.
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Degradation of organic chemicals in natural soils depends on oxidation-reduction conditions. To protect our groundwater resources we need to understand the degradation processes under anaerobic conditions. Available iron and manganese oxides are used as electron acceptors for anaerobic degradation and are reduced to the dissolved form of metallic cations in pore water. To monitor this process is a challenge, because anaerobic conditions are difficult to sample directly without introducing oxygen. A few studies have shown an impact of iron reduction on spectral induced polarisation (SIP) signature, often associated with bacterial growth. Our objective is to study the impact of iron and manganese oxide dissolution, caused by degradation of an organic compound, with spectral induced polarisation signatures. Twenty-six vertical columns (30 cm high, inner diameter 4.6 cm) were filled with a sand rich in oxides (manganese and iron) with a static water table in the middle. In half of the columns, a 2 cm high contaminated layer was installed just above the water table. As the contaminant degrades, the initial oxygen is consumed and anaerobic conditions form Every three days over a period of one month, spectral induced polarisation (twenty frequencies between 5mHz and 10 kHz) data were collected on six columns: three contaminated replicates and three control replicates. Chemical analysis was done on twenty columns assigned for destructive water sampling, ten contaminated columns and ten control. The results show an increase of the real conductivity associated with the degradation processes, independent of frequency. Compared with the pore water electrical conductivity in the saturated zone, the real conductivity measurement revealed the formation of surface conductivity before iron was released in the pore water. In parallel, we also observed an evolution of the imaginary conductivity in both saturated and unsaturated zones at frequencies below 1 Hz. Overall, the anaerobic reduction of iron and manganese oxide during the organic degradation increased both the conductive and polarisation component of the complex conductivity.
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We describe Arge bella Wei & Du sp. nov., a large and beautiful species of Argidae from south China, and report its mitochondrial genome based on high-throughput sequencing data. We present the gene order, nucleotide composition of proteincoding genes (PCGs), and the secondary structures of RNA genes. The nearly complete mitochondrial genome of A. bella has a length of 15,576 bp and a typical set of 37 genes (22 tRNAs, 13 PCGs, and 2 rRNAs). Three tRNAs are rearranged in the A. bella mitochondrial genome as compared to the ancestral type in insects: trnM and trnQ are shuffled, while trnW is translocated from the trnW -trnC-trnY cluster to a location downstream of trnI. All PCGs are initiated by ATN codons, and terminated with TAA, TA or T as stop codons. All tRNAs have a typical cloverleaf secondary structure, except for trnS1. H821 of rrnS and H976 of rrnL are redundant. A phylogenetic analysis based on mitochondrial genome sequences of A. bella, 21 other symphytan species, two apocritan representatives, and four outgroup taxa supports the placement of Argidae as sister to the Pergidae within the symphytan superfamily Tenthredinoidea.
Forfattere
Victor Phani Vishal S. Somvanshi Rohit N. Shukla Keith Davies Uma RaoSammendrag
Background: Southern root-knot nematode Meloidogyne incognita (Kofoid and White, 1919), Chitwood, 1949 is a key pest of agricultural crops. Pasteuria penetrans is a hyperparasitic bacterium capable of suppressing the nematode reproduction, and represents a typical coevolved pathogen-hyperparasite system. Attachment of Pasteuria endospores to the cuticle of second-stage nematode juveniles is the first and pivotal step in the bacterial infection. RNA-Seq was used to understand the early transcriptional response of the root-knot nematode at 8 h post Pasteuria endospore attachment. Results: A total of 52,485 transcripts were assembled from the high quality (HQ) reads, out of which 582 transcripts were found differentially expressed in the Pasteuria endospore encumbered J2 s, of which 229 were up-regulated and 353 were down-regulated. Pasteuria infection caused a suppression of the protein synthesis machinery of the nematode. Several of the differentially expressed transcripts were putatively involved in nematode innate immunity, signaling, stress responses, endospore attachment process and post-attachment behavioral modification of the juveniles. The expression profiles of fifteen selected transcripts were validated to be true by the qRT PCR. RNAi based silencing of transcripts coding for fructose bisphosphate aldolase and glucosyl transferase caused a reduction in endospore attachment as compared to the controls, whereas, silencing of aspartic protease and ubiquitin coding transcripts resulted in higher incidence of endospore attachment on the nematode cuticle. Conclusions: Here we provide evidence of an early transcriptional response by the nematode upon infection by Pasteuria prior to root invasion. We found that adhesion of Pasteuria endospores to the cuticle induced a downregulated protein response in the nematode. In addition, we show that fructose bisphosphate aldolase, glucosyl transferase, aspartic protease and ubiquitin coding transcripts are involved in modulating the endospore attachment on the nematode cuticle. Our results add new and significant information to the existing knowledge on early molecular interaction between M. incognita and P. penetrans.