Publikasjoner
NIBIOs ansatte publiserer flere hundre vitenskapelige artikler og forskningsrapporter hvert år. Her finner du referanser og lenker til publikasjoner og andre forsknings- og formidlingsaktiviteter. Samlingen oppdateres løpende med både nytt og historisk materiale. For mer informasjon om NIBIOs publikasjoner, besøk NIBIOs bibliotek.
2016
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Forfattere
Yordanys R. González Orelvis Portal Erik Lysøe Annarella Chea Luis Rojas Nicolai Meyling Ingeborg KlingenSammendrag
The aim of this study was to evaluate the effect of conventional versus organic common bean (Phaseolus vulgaris) production on natural occurrence of Beauveria spp. as entophytes in bean plant tissue, from soil and as infections in stink bugs (Hemiptera: Pentatomidae), an important pest of bean in Cuba. Twenty-four organic and conventionally managed bean fields were sampled from September 2014 to April 2015 and Beauveria spp. were isolated and DNA extracted. PCR amplification of the intergenic Bloc region was performed for the identification of Beauveria species. Eighty-seven isolates were obtained from the soil samples by using the Galleria mellonella baiting technique. Further, 45 isolates were obtained from endophytic tissues of bean plant parts and 18 isolates were acquired from stink bugs. Only Beauveria bassiana was identified by DNA sequencing in this material. B. bassiana was more prevalent in soil, plant and stink bugs sampled from organic fields (41% soil, 22% plant, 9% bugs) compared to conventional fields (17% soil, 8% plant, 2% bugs). All plant parts were colonized by B. bassiana, but a significantly higher occurrence of this fungus was found in roots (9%) compared to stems (6%), leaves (4%) and pods (2%) in organic fields. In conventional fields there was a significantly higher occurrence of B. bassiana acquired from root (4%) and stem (3%) compared to leaves (1%) and pods (1%). Mating type PCR assays revealed that each of the isolates carried single mating types, with frequencies of 146/150 (MAT1) and 4/150 (MAT2), indicating limited potential for recombination. Our findings show that B. bassiana occur naturally as endophytes in bean fields in Cuba and contribute to a better ecological understanding of B. bassiana in agriculture.
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Forfattere
Hadush Tsehaye Beyene Abdelhameed Elameen Anne Marte Tronsmo Leif Sundheim Arne Tronsmo Dereje Assefa May Bente BrurbergSammendrag
Amplified fragment length polymorphism (AFLP) was used to study the genetic variation among 80 F. verticillioides isolates from kernels of Ethiopian maize, collected from 20 different maize growing areas in four geographic regions. A total of 213 polymorphic fragments were obtained using six EcoRI/MseI primer combinations. Analysis of the data based on all 213 polymorphic AFLP fragments revealed high level of genetic variation in the F. verticillioides entities in Ethiopia. About 58% of the fragments generated were polymorphic. The genetic similarity among F. verticillioides isolates varied from 46% to 94% with a mean Dice similarity of 73%. Unweighted Pair Group Method with Arithmetic Average (UPGMA) analysis revealed two main groups and four subgroups. The principal coordinate analysis (PCO) also displayed two main groups that agreed with the results of UPGMA analysis, and there was no clear pattern of clustering of isolates according to geographic origin. Analysis of molecular variance: (AMOVA) showed that only 1.5% of the total genetic variation was between geographic regions, while 98.5% was among isolates from the same geographic regions of Ethiopia. Eighty distinct haplotypes were recognized among the 80 isolates analyzed. Hence, breeding efforts should concentrate on quantitative resistance that is effective against all genotypes of the pathogen.
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This contribution demonstrates an example of experimental automatic image analysis to detect spores prepared on microscope slides derived from trapping. The application is to monitor aerial spore counts of the entomopathogenic fungus Pandora neoaphidis which may serve as a biological control agent for aphids. Automatic detection of such spores can therefore play a role in plant protection. The present approach for such detection is a modification of traditional manual microscopy of prepared slides, where autonomous image recording precedes computerised image analysis. The purpose of the present image analysis is to support human visual inspection of imagery data – not to replace it. The workflow has three components: • Preparation of slides for microscopy. • Image recording. • Computerised image processing where the initial part is, as usual, segmentation depending on the actual data product. Then comes identification of blobs, calculation of principal axes of blobs, symmetry operations and projection on a three parameter egg shape space.
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A controlled climatic chamber microcosm experiment was conducted to examine how light affects the hourly sporulation pattern of the beneficial mite pathogenic fungus Neozygites floridana during a 24 h cyclus over a period of eight consecutive days. This was done by inoculating two-spotted spider mites (Tetranychus urticae) with N. floridana and placing them on strawberry plants for death and sporulation. Spore (primary conidia) discharge was observed by using a spore trap. Two light regimes were tested: Plant growth light of 150 μmol m−2 s−1 for 12 h supplied by high pressure sodium lamps (HPS), followed by either; (i) 4 h of 50 μmol m−2 s−1 light with similar HPS lamps followed by 8 h darkness (full HPS light + reduced HPS light + darkness) or (ii) 4 h of 50 μmol m−2 s−1 red light followed by 8 h darkness (full HPS light + red light + darkness). A clear difference in hourly primary conidia discharge pattern between the two different light treatments was seen and a significant interaction effect between light treatment and hour in day during the 24 h cycle was observed. The primary conidia discharge peak for treatment (ii) that included red light was mainly reached within the red light hours (19:00–23:00) and the dark hours (23:00–07:00). The primary conidia discharge peak for treatment (i) with HPS light only was mainly reached within the dark hours (23:00–07:00).