Publikasjoner
NIBIOs ansatte publiserer flere hundre vitenskapelige artikler og forskningsrapporter hvert år. Her finner du referanser og lenker til publikasjoner og andre forsknings- og formidlingsaktiviteter. Samlingen oppdateres løpende med både nytt og historisk materiale. For mer informasjon om NIBIOs publikasjoner, besøk NIBIOs bibliotek.
2025
Forfattere
Paul Eric Aspholm David Kniha Amelie Bringemeier Philipp Michel Monica Fongen Hans Nyeggen Jarle W. BjerkeSammendrag
Det er ikke registrert sammendrag
Sammendrag
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Forfattere
Paul Eric Aspholm Carmen Rizzo Gabriella Caruso Giovanna Maimone Luisa Patrolecco Marco Termine Marco Bertolino Stefania Giannarelli Alessandro Ciro Rappazzo Josef Elster Alessio Lena Maria Papale Tanita Pescatore Jasmin Rauseo Rosamaria Soldano Francesca Spataro Maurizio Azzaro A Lo GiudiceSammendrag
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Sammendrag
Mitochondrial genomes (mitogenomes) display relatively rapid mutation rates, low sequence recombination, high copy numbers, and maternal inheritance patterns, rendering them valuable blueprints for mapping lineages, uncovering historical migration patterns, understanding intraspecific population dynamics, and investigating how environmental pressures shape traits underpinned by genetic variation. Here, we present the bioinformatic pipeline and code used to assemble and annotate the complete mitogenomes of five houndsharks (Chondrichthyes: Triakidae) and compare them to the mitogenomes of other closely related species. We demonstrate the value of a combined assembly approach for detecting deviations in mitogenome structure and describe how to select an assembly approach that best suits the sequencing data. The datasets required to run our analyses are available on the GitHub and Dryad repositories
Sammendrag
The limited standards for the rigorous and objective use of mitochondrial genomes (mitogenomes) can lead to uncertainties regarding the phylogenetic relationships of taxa under varying evolutionary constraints. The mitogenome exhibits heterogeneity in base composition, and evolutionary rates may vary across different regions, which can cause empirical data to violate assumptions of the applied evolutionary models. Consequently, the unique evolutionary signatures of the dataset must be carefully evaluated before selecting an appropriate approach for phylogenomic inference. Here, we present the bioinformatic pipeline and code used to expand the mitogenome phylogeny of the order Carcharhiniformes (groundsharks), with a focus on houndsharks (Chondrichthyes: Triakidae). We present a rigorous approach for addressing difficult-to-resolve phylogenies, incorporating multi-species coalescent modelling (MSCM) to address gene/species tree discordance. The protocol describes carefully designed approaches for preparing alignments, partitioning datasets, assigning models of evolution, inferring phylogenies based on traditional site-homogenous concatenation approaches as well as under multispecies coalescent and site heterogenous models, and generating statistical data for comparison of different topological outcomes. The datasets required to run our analyses are available on GitHub and Dryad repositories.
Forfattere
Tatsiana EspevigSammendrag
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Sammendrag
• Conventional forest operations can exert significant impacts on the hydrology and water quality of downstream aquatic environments. • Few research results have been published on the impacts of continuous cover forestry (CCF) on water quality. • CCF could be useful for reducing nutrient, carbon, and suspended solid exports in waterways. • CCF may be a better alternative to rotation forestry (RF) on mineral soils and drained peatlands. • Further research is needed on the many processes controlling nutrient and carbon exports in CCF and RF.
Sammendrag
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Forfattere
Ingvild Skumlien Furuseth Robert Barneveld Stefano Basso Ashenafi Seifu Gragne Line Johanne Barkved Frode Sundnes Caroline Enge Katarina Cetinic Maeve Mcgovern Sigrid Haande Jes Jessen RasmussenSammendrag
Prosjektleder: Ingvild Skumlien Furuseth
Forfattere
Ove BergersenSammendrag
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