Publikasjoner
NIBIOs ansatte publiserer flere hundre vitenskapelige artikler og forskningsrapporter hvert år. Her finner du referanser og lenker til publikasjoner og andre forsknings- og formidlingsaktiviteter. Samlingen oppdateres løpende med både nytt og historisk materiale. For mer informasjon om NIBIOs publikasjoner, besøk NIBIOs bibliotek.
2021
Sammendrag
Simple Summary: One of the main insect pests in protected strawberry production are thrips, but little is known about which species of thrips are present in the production system. In this study, we identified the thrips species of adults and larvae present in two strawberry cultivars at a commercial strawberry farm in Denmark. The most abundant species found were Frankliniella intonsa, followed by Thrips tabaci. The abundance of thrips peaked in July (temperature range 18–23 ◦C, mean humidity 65%, mean precipitation 5 mm). More thrips were found in the earlier flowering cultivar. In order to optimize control of thrips, a fundamental first step is knowing which species are present on the target crop. Abstract: Thrips are a major pest in protected strawberry production. Knowledge of thrips species composition could be instrumental for improved thrips management, but very little is known about which species are present in strawberries grown in high-tunnels in Denmark. Thrips (adults and larvae) were sampled in two strawberry tunnels of the cultivars Murano and Furore from May to August 2018, in the middle and in the edges of the tunnels. The most abundant thrips species found in the tunnels were Frankliniella intonsa and Thrips tabaci adults. Frankliniella intonsa were also the most frequently found species of the immatures sampled, followed by T. tabaci larvae, and other species. The number of thrips differed between the two cultivars, sampling times and location in the tunnel. Frankliniella intonsa was more abundant in the middle of the tunnels, while T. tabaci was more abundant in the edge of the tunnels adjacent to the field margins. The number of thrips peaked by the end of July. Both chemical and biological control should consider species composition and occurrence; hence, a fundamental first step for thrips management is to identify the species present on the target crop.
Forfattere
Svenja B. KroegerSammendrag
Det er ikke registrert sammendrag
Forfattere
Jorge Aldea Ricardo Ruiz-Peinado Miren del Río Hans Pretzsch Michael Heym Gediminas Brazaitis Aris Jansons Marek Metslaid Ignacio Barbeito Kamil Bielak Aksel Granhus Stig-Olof Holm Arne Nothdurft Roman Sitko Magnus LöfSammendrag
Mixed forests are suggested as a strategic adaptation of forest management to climate change. Scots pine (Pinus sylvestris L.) and Norway spruce (Picea abies (L.) Karst.) are tree species of high economic and ecological value for European forestry. Both species coexist naturally in a large part of their distributions but there is a lack of knowledge on the ecological functioning of mixtures of these species and how to manage such stands. This paper analyses these species' intra-and inter-specific competition, including size-symmetric vs. size-asymmetric competition, and explore the effect of weather conditions on tree growth and competition. We studied basal area growth at tree level for Scots pine and Norway spruce in mixed versus pure stands in 22 triplets of fully-stocked plots along a broad range of ecological conditions across Europe. Stand inventory and increment cores provided insights into how species mixing modifies tree growth compared with neighbouring pure stands. Five different competition indices, weather variables and their interactions were included and checked in basal area growth models using a linear mixed model approach. Interspecific size-asymmetric competition strongly influenced growth for both tree species, and was modulated by weather conditions. However, species height stratification in mixed stands resulted in a greater tree basal area growth of Scots pine (10.5 cm 2 year − 1) than in pure stands (9.3 cm 2 year − 1), as this species occupies the upper canopy layer. Scots pine growth depended on temperature and drought, whereas Norway spruce growth was influenced only by drought. Interspecific site-asymmetric competition increased in cold winters for Scots pine, and decreased after a drought year for Nor-way spruce. Although mixtures of these species may reduce tree size for Norway spruce, our results suggest that this could be offset by faster growth in Scots pine. How inter-specific competition and weather conditions alter tree growth may have strong implications for the management of Scots pine-Norway spruce mixtures along the rotation period into the ongoing climate change scenario.
Forfattere
Irina Orestovna Averkina Ivan Paponov Jose J Sanchez-Serrano Cathrine LilloSammendrag
Plant growth-promoting rhizobacteria (PGPR) stimulate plant growth, but the underlying mechanism is poorly understood. In this study, we asked whether PROTEIN PHOSPHATASE 2A (PP2A), a regulatory molecular component of stress, growth, and developmental signaling networks in plants, contributes to the plant growth responses induced by the PGPR Azospirillum brasilense (wild type strain Sp245 and auxin deficient strain FAJ0009) and Pseudomonas simiae (WCS417r). The PGPR were co-cultivated with Arabidopsis wild type (WT) and PP2A (related) mutants. These plants had mutations in the PP2A catalytic subunits (C), and the PP2A activity-modulating genes LEUCINE CARBOXYL METHYL TRANSFERASE 1 (LCMT1) and PHOSPHOTYROSYL PHOSPHATASE ACTIVATOR (PTPA). When exposed to the three PGPR, WT and all mutant Arabidopsis revealed the typical phenotype of PGPR-treated plants with shortened primary root and increased lateral root density. Fresh weight of plants generally increased when the seedlings were exposed to the bacteria strains, with the exception of catalytic subunit double mutant c2c5. The positive effect on root and shoot fresh weight was especially pronounced in Arabidopsis mutants with low PP2A activity. Comparison of different mutants indicated a significant role of the PP2A catalytic subunits C2 and C5 for a positive response to PGPR.
Sammendrag
Det er ikke registrert sammendrag
Forfattere
Francesco Maria Sabatini Jonathan Lenoir Tarek Hattab Elise Aimee Arnst Milan Chytrý Jürgen Dengler Patrice De Ruffray Stephan M. Hennekens Ute Jandt Florian Jansen Borja Jiménez-Alfaro Jens Kattge Aurora Levesley Valério D. Pillar Oliver Purschke Brody Sandel Fahmida Sultana Tsipe Aavik Svetlana Aćić Alicia T.R. Acosta Emiliano Agrillo Miguel Álvarez Iva Apostolova Mohammed A. S. Arfin Khan Luzmila Arroyo Fabio Attorre Isabelle Aubin Arindam Banerjee Marijn Bauters Yves Bergeron Erwin Bergmeier Idoia Biurrun Anne D. Björkman Gianmaria Bonari Viktoria Bondareva Jörg Brunet Andraž Čarni Laura Casella Luis Cayuela Tomas Cerny Victor Chepinoga János Csiky Renata Ćušterevska Els De Bie André Luis De Gasper Michele De Sanctis Panayotis Dimopoulos Jiri Dolezal Tetiana Dziuba Mohamed Abd El-Rouf Mousa El-Sheikh Brian Enquist Jörg Ewald Farideh Fazayeli Richard Field Manfred Finckh Sophie Gachet Antonio Galán-De-Mera Emmanuel Garbolino Hamid Gholizadeh Melisa Giorgis Valentin Golub Inger Greve Alsos John Arvid Grytnes Gregory Richard Guerin Alvaro G. Gutiérrez Sylvia Haider Mohamed Z. Hatim Bruno Herault Guillermo Hinojos Mendoza Norbert Holzel Jürgen Homeier Zygmunt Kącki Jutta Kapfer Dirk Nikolaus Karger Ali Kavgaci Elizabeth Kearsley Helge BruelheideSammendrag
Motivation Assessing biodiversity status and trends in plant communities is critical for understanding, quantifying and predicting the effects of global change on ecosystems. Vegetation plots record the occurrence or abundance of all plant species co-occurring within delimited local areas. This allows species absences to be inferred, information seldom provided by existing global plant datasets. Although many vegetation plots have been recorded, most are not available to the global research community. A recent initiative, called ‘sPlot’, compiled the first global vegetation plot database, and continues to grow and curate it. The sPlot database, however, is extremely unbalanced spatially and environmentally, and is not open-access. Here, we address both these issues by (a) resampling the vegetation plots using several environmental variables as sampling strata and (b) securing permission from data holders of 105 local-to-regional datasets to openly release data. We thus present sPlotOpen, the largest open-access dataset of vegetation plots ever released. sPlotOpen can be used to explore global diversity at the plant community level, as ground truth data in remote sensing applications, or as a baseline for biodiversity monitoring. Main types of variable contained Vegetation plots (n = 95,104) recording cover or abundance of naturally co-occurring vascular plant species within delimited areas. sPlotOpen contains three partially overlapping resampled datasets (c. 50,000 plots each), to be used as replicates in global analyses. Besides geographical location, date, plot size, biome, elevation, slope, aspect, vegetation type, naturalness, coverage of various vegetation layers, and source dataset, plot-level data also include community-weighted means and variances of 18 plant functional traits from the TRY Plant Trait Database. Spatial location and grain Global, 0.01–40,000 m². Time period and grain 1888–2015, recording dates. Major taxa and level of measurement 42,677 vascular plant taxa, plot-level records. Software format Three main matrices (.csv), relationally linked.
Sammendrag
Det er ikke registrert sammendrag
Sammendrag
Large population increases of Arctic-breeding waterfowls over recent decades have intensified the conflict with agricultural interests in both Eurasia and North America. In the spring-staging region Vesterålen in sub-Arctic Norway, sheep, dairy and meat farmers have reported reduced agricultural grassland yields due to pink-footed geese Anser brachyrhynchus and barnacle geese Branta leucopsis that rest and forage in the region for 3–4 weeks in spring on their way to their breeding grounds on Svalbard. Here, we report from an experimental exclosure design where goose access to plots at three grassland fields in Vesterålen was prevented. The experiment was conducted over 3 years between 2012 and 2014. Goose abundance varied greatly between fields and years as a function of variable spring weather and forage quantity, facilitating evaluation of longer-term impacts under contrasting grazing intensities. First and second harvest yields across fields and years were 20% and 19% higher in exclosures than in plots open for grazing, while total yields (sum of first and second harvests) were on average 27% higher. Within-year effects on harvest yields varied substantially, primarily due to highly contrasting sward development during the spring-staging periods. Cool weather (2012) led to slow sward development and little or no effects on harvest yields, warmer weather (2013) resulted in generally large effects, while variable weather (2014) led to treatment effects varying across fields, with one field experiencing 61% higher yields in exclosures while there were no significant impacts on first-harvest yields at the two other fields. Goose grazing did not increase dry weight-based proportions of weeds. Overall, the farmers' reports on yield-loss due to goose grazing were confirmed, although impacts varied substantially between years. A novel finding is that second-harvest yields were also reduced. For the most affected farmers, it is unlikely that the current subsidy scheme is sufficient to cover all the their losses.
Forfattere
Ziyan Xu Yongjie Kuang Bin Ren Daqi Yan Fang Yan Carl Jonas Jorge Spetz Wenxian Sun Guirong Wang Xueping Zhou Huanbin ZhouSammendrag
Background Plant genome engineering mediated by various CRISPR-based tools requires specific protospacer adjacent motifs (PAMs), such as the well-performed NGG, NG, and NNG, to initiate target recognition, which notably restricts the editable range of the plant genome. Results In this study, we thoroughly investigate the nuclease activity and the PAM preference of two structurally engineered SpCas9 variants, SpG and SpRY, in transgenic rice. Our study shows that SpG nuclease favors NGD PAMs, albeit less efficiently than the previously described SpCas9-NG, and that SpRY nuclease achieves efficient editing across a wide range of genomic loci, exhibiting a preference of NGD as well as NAN PAMs. Furthermore, SpRY-fused cytidine deaminase hAID*Δ and adenosine deaminase TadA8e are generated, respectively. These constructs efficiently induce C-to-T and A-to-G conversions in the target genes toward various non-canonical PAMs, including non-G PAMs. Remarkably, high-frequency self-editing events (indels and DNA fragments deletion) in the integrated T-DNA fragments as a result of the nuclease activity of SpRY are observed, whereas the self-editing of SpRY nickase-mediated base editor is quite low in transgenic rice lines. Conclusions The broad PAM compatibility of SpRY greatly expands the targeting scope of CRISPR-based tools in plant genome engineering.
Forfattere
Trygve S. Aamlid Jon Sæland Arne Svalastog Simen Settendal Kristine Sundsdal Trond Olav PettersenSammendrag
Det er ikke registrert sammendrag