Publikasjoner
NIBIOs ansatte publiserer flere hundre vitenskapelige artikler og forskningsrapporter hvert år. Her finner du referanser og lenker til publikasjoner og andre forsknings- og formidlingsaktiviteter. Samlingen oppdateres løpende med både nytt og historisk materiale. For mer informasjon om NIBIOs publikasjoner, besøk NIBIOs bibliotek.
2018
Authors
Victor Phani Vishal S. Somvanshi Rohit N. Shukla Keith Davies Uma RaoAbstract
Background: Southern root-knot nematode Meloidogyne incognita (Kofoid and White, 1919), Chitwood, 1949 is a key pest of agricultural crops. Pasteuria penetrans is a hyperparasitic bacterium capable of suppressing the nematode reproduction, and represents a typical coevolved pathogen-hyperparasite system. Attachment of Pasteuria endospores to the cuticle of second-stage nematode juveniles is the first and pivotal step in the bacterial infection. RNA-Seq was used to understand the early transcriptional response of the root-knot nematode at 8 h post Pasteuria endospore attachment. Results: A total of 52,485 transcripts were assembled from the high quality (HQ) reads, out of which 582 transcripts were found differentially expressed in the Pasteuria endospore encumbered J2 s, of which 229 were up-regulated and 353 were down-regulated. Pasteuria infection caused a suppression of the protein synthesis machinery of the nematode. Several of the differentially expressed transcripts were putatively involved in nematode innate immunity, signaling, stress responses, endospore attachment process and post-attachment behavioral modification of the juveniles. The expression profiles of fifteen selected transcripts were validated to be true by the qRT PCR. RNAi based silencing of transcripts coding for fructose bisphosphate aldolase and glucosyl transferase caused a reduction in endospore attachment as compared to the controls, whereas, silencing of aspartic protease and ubiquitin coding transcripts resulted in higher incidence of endospore attachment on the nematode cuticle. Conclusions: Here we provide evidence of an early transcriptional response by the nematode upon infection by Pasteuria prior to root invasion. We found that adhesion of Pasteuria endospores to the cuticle induced a downregulated protein response in the nematode. In addition, we show that fructose bisphosphate aldolase, glucosyl transferase, aspartic protease and ubiquitin coding transcripts are involved in modulating the endospore attachment on the nematode cuticle. Our results add new and significant information to the existing knowledge on early molecular interaction between M. incognita and P. penetrans.
Abstract
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Authors
Øyvind Kaste Eva Skarbøvik Inga Greipsland Cathrine Brecke Gundersen Kari Austnes Liv Bente Skancke Jose-Luis Guerrero James Edward SampleAbstract
Project manager Hans Fredrik Veiteberg Braaten
Authors
Atle HaugeAbstract
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Authors
Aksel Bernhoft Geir Aamodt Per Nafstad Katrine Skalleberg Helena Nordh Peter Butenschøn Ellen de Vibe Anna Marie Nicolaysen Marianne Leisner Andreas Capjon Stephen Barstow Erik J. JonerAbstract
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Authors
Ivan N. Bolotov Alexander A. Makhrov Mikhail Yu. Gofarov Olga V. Aksenova Paul Eric Aspholm Yulia V. Bespalaya Mikhail B. Kabakov Yulia S. Kolosova Alexander V. Kondakov Thomas Ofenböck Andrew N. Ostrovsky Igor Yu. Popov Ted von Proschwitz Mudite Rudzite Maris Rudzitis Svetlana E. Sokolova Ilmari Valovirta Ilya V. Vikhrev Maxim V. Vinarski Alexey A. ZotinAbstract
The effects of climate change on oligotrophic rivers and their communities are almost unknown, albeit these ecosystems are the primary habitat of the critically endangered freshwater pearl mussel and its host fishes, salmonids. The distribution and abundance of pearl mussels have drastically decreased throughout Europe over the last century, particularly within the southern part of the range, but causes of this wide-scale extinction process are unclear. Here we estimate the effects of climate change on pearl mussels based on historical and recent samples from 50 rivers and 6 countries across Europe. We found that the shell convexity may be considered an indicator of the thermal effects on pearl mussel populations under warming climate because it reflects shifts in summer temperatures and is significantly different in viable and declining populations. Spatial and temporal modeling of the relationship between shell convexity and population status show that global climate change could have accelerated the population decline of pearl mussels over the last 100 years through rapidly decreasing suitable distribution areas. Simulation predicts future warming-induced range reduction, particularly in southern regions. These results highlight the importance of large-scale studies of keystone species, which can underscore the hidden effects of climate warming on freshwater ecosystems.
Abstract
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Abstract
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Authors
Francesca Giampieri Sadia Afrin Derek Stewart Gordon J. McDougall Rex Brennan Lesley Blyth Massimiliano Gasparrini Luca Mazzoni Franco Capocasa José Miguel Alvarez-Suarez Stefano Bompadre Pedro Nogueira Brás de Oliveira Claudia N. Santos Manuel Masias Pablo Agudo Jorge Crespo Bruno Mezzetti Tamara Y. Forbes-Hernández Maurizio BattinoAbstract
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Abstract
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