Publikasjoner
NIBIOs ansatte publiserer flere hundre vitenskapelige artikler og forskningsrapporter hvert år. Her finner du referanser og lenker til publikasjoner og andre forsknings- og formidlingsaktiviteter. Samlingen oppdateres løpende med både nytt og historisk materiale. For mer informasjon om NIBIOs publikasjoner, besøk NIBIOs bibliotek.
2017
Sammendrag
In fungi, distribution of secondary metabolite (SM) gene clusters is often associated with host- or environment-specific benefits provided by SMs. In the plant pathogen Alternaria brassicicola (Dothideomycetes), the DEP cluster confers an ability to synthesize the SM depudecin, a histone deacetylase inhibitor that contributes weakly to virulence. The DEP cluster includes genes encoding enzymes, a transporter, and a transcription regulator. We investigated the distribution and evolution of the DEP cluster in 585 fungal genomes and found a wide but sporadic distribution among Dothideomycetes, Sordariomycetes, and Eurotiomycetes. We confirmed DEP gene expression and depudecin production in one fungus, Fusarium langsethiae. Phylogenetic analyses suggested 6–10 horizontal gene transfers (HGTs) of the cluster, including a transfer that led to the presence of closely related cluster homologs in Alternaria and Fusarium. The analyses also indicated that HGTs were frequently followed by loss/pseudogenization of one or more DEP genes. Independent cluster inactivation was inferred in at least four fungal classes. Analyses of transitions among functional, pseudogenized, and absent states of DEP genes among Fusarium species suggest enzyme-encoding genes are lost at higher rates than the transporter (DEP3) and regulatory (DEP6) genes. The phenotype of an experimentally-induced DEP3 mutant of Fusarium did not support the hypothesis that selective retention of DEP3 and DEP6 protects fungi from exogenous depudecin. Together, the results suggest that HGT and gene loss have contributed significantly to DEP cluster distribution, and that some DEP genes provide a greater fitness benefit possibly due to a differential tendency to form network connections.
Forfattere
Tatsiana Espevig May Bente Brurberg Marina Usoltseva Åslög Dahl Agnar Kvalbein Karin Normann Jo Anne CrouchSammendrag
Dollar spot is a destructive and widespread disease affecting most turfgrass species, but until recently it has been absent from the Scandinavian countries of northern Europe. In the fall of 2014, disease symptoms consistent with dollar spot were observed on a golf course fairway in Sweden. A fungus was isolated from symptomatic turf and identified as Sclerotinia homoeocarpa on the basis of ribosomal deoxyribonucleic acid (rDNA) internal transcribed spacer (ITS) sequences, morphology, and culture characteristics. The ITS sequence was identical to isolates of S. homoeocarpa from the eastern and midwestern United States. Koch’s postulates were fulfilled, confirming the S. homoeocarpa isolate as the causal agent. This is the first report of turfgrass dollar spot in Sweden and only the second report of the disease from Scandinavia. Because pesticides are rarely used in the cultivation of Scandinavian turfgrass, dollar spot disease may prove difficult to control through conventional means and potentially represents a major threat to the industry.
Forfattere
John P. Clarkson Rachel J. Warmington Peter G. Walley Matthew Denton-Giles Martin J. Barbetti Guro Brodal Berit NordskogSammendrag
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Forfattere
Guro BrodalSammendrag
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