Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2021
Abstract
Plant virus eradication is a prerequisite for the use of virus-free propagules for sustainable crop production. In contrast, virus preservation is required for all types of applied and basic research of viruses. Shoot tip cryopreservation can act as a double-edged strategy, facilitating either virus eradication or virus preservation in cryoderived plants. Here, we tested the efficacies of shoot tip cryopreservation for virus eradication and preservation in shallot (Allium cepa var. aggregatum). In vitro stock shallot shoots infected with onion yellow dwarf virus (OYDV) and shallot latent virus were thermotreated for 0, 2, and 4 weeks at a constant temperature of 36℃ before shoot tip cryopreservation. Results showed that viruses were preserved in recovered shoots when thermotherapy was not applied. Although thermotherapy lowered the regrowth levels of cryotreated shoot tips, the efficiency of virus eradication increased from 5% to 54%. Immunolocalization of OYDV and histological observation of cryotreated shoot tips showed the high frequency of virus preservation was due to the viral invasion of cells close to the apical meristem and the high proportion of cells surviving. Four weeks of thermotherapy drastically decreased the distribution of OYDV, as well as the percentage of surviving cells within the shoot tips, thereby promoting virus eradication. Virus-free plants obtained from combining thermotherapy with cryotherapy showed significantly improved vegetative growth and bulb production. The present study reports how thermotherapy can act as a trigger to facilitate either the safe preservation of Allium viruses or the production of virus-free shallot plants.
Authors
Min-Rui Wang Wenlu Bi Mukund R. Shukla Li Ren Zhibo Hamborg Dag-Ragnar Blystad Praveen K. Saxena Qiao-Chun WangAbstract
Cryopreservation is considered an ideal strategy for the long-term preservation of plant genetic resources. Significant progress was achieved over the past several decades, resulting in the successful cryopreservation of the genetic resources of diverse plant species. Cryopreservation procedures often employ in vitro culture techniques and require the precise control of several steps, such as the excision of explants, preculture, osmo- and cryoprotection, dehydration, freeze-thaw cycle, unloading, and post-culture for the recovery of plants. These processes create a stressful environment and cause reactive oxygen species (ROS)-induced oxidative stress, which is detrimental to the growth and regeneration of tissues and plants from cryopreserved tissues. ROS-induced oxidative stresses were documented to induce (epi)genetic and somatic variations. Therefore, the development of true-to-type regenerants of the source germplasm is of primary concern in the application of plant cryopreservation technology. The present article provides a comprehensive assessment of epigenetic and genetic integrity, metabolic stability, and field performance of cryopreserved plants developed in the past decade. Potential areas and the directions of future research in plant cryopreservation are also proposed.
Abstract
No abstract has been registered
Authors
Karl Thunes Geir Einar Ellefsen Søli Csaba Thuroczy Arne Fjellberg Stefan Olberg Steffen Roth Carl-C. Coulianos R. Henry L. Disney Josef Stary G. (Bert) Vierbergen Terje Jonassen Johannes Anonby Arne Köhler Frank Menzel Ryszard Szadziewski Elisabeth Stur Wolfgang Adaschkiewitz Kjell M. Olsen Torstein Kvamme Anders Endrestøl Sigitas Podenas Sverre Kobro Lars Ove Hansen Gunnar Mikalsen Kvifte Jean-Paul Haenni Louis BoumansAbstract
(1) We document the invertebrate fauna collected from 24 oak canopies in east and west Norway as a contribution to the Norwegian Biodiversity Information Centre’s ‘The Norwegian Taxonomy Initiative’. (2) A snap-shot inventory of the canopies was recorded by means of emitting a mist of natural pyrethrum into the canopies at night using a petrol-driven fogger and collecting the specimens in butterfly nets spread on the ground under the canopy. (3) Almost the entire catch of more than 6800 specimens was identified to 722 species. Out of 92 species new to the Norwegian fauna, 21 were new to science and, additionally, 15 were new to the Nordic fauna. Diptera alone constituted nearly half of the species represented, with 61 new records (18 new species). Additionally, 24 Hymenoptera (one new species), six oribatid mites (two new species) and one Thysanoptera were new to the Norwegian fauna. (4) Our study emphasizes the importance of the oak tree as a habitat both for a specific fauna and occasional visitors, and it demonstrates that the canopy fogging technique is an efficient way to find the ‘hidden fauna’ of Norwegian forests. The low number of red listed species found reflects how poor the Norwegian insect fauna is still studied. Moreover, the implication of the IUCN red list criteria for newly described or newly observed species is discussed.
Authors
Sophie Mentzel Merete Grung Knut-Erik Tollefsen Marianne Stenrød Roger Holten S. Jannicke MoeAbstract
Future weather patterns are expected to result in increased precipitation and temperature, in Northern Europe. These changes can potentially cause an increase in plant disease and insect pests which will alter agricultural practice amongst other things the used crop types and application patterns of pesticides. We use a Bayesian network to explore a probabilistic risk assessment approach to better account for variabilities and magnitudes of pesticide exposure to the aquatic ecosystem. As Bayesian networks link selected input and output variables from various models and other information sources, they can serve as meta-models. In this study, we are using a pesticide fate and transport models (e.g. WISPE) with specific environmental factors such as soil and site parameters together with chemical properties and climate scenarios that are linked to a representative Norwegian study area. The derived exposure of pesticide of the study area is integrated in the Bayesian network model to estimate the risk to the aquatic ecosystem also integrating an effect distribution derived from toxicity test. This Bayesian network model will allow to incorporate climate predictions into ecological risk assessment.
Abstract
Plantevernmidler er et viktig verktøy i dagens plantevernpraksis i jordbruket for å sikre gode avlinger. Miljørisikoen knyttet til det enkelte plantevernmiddel vurderes nøye før det godkjennes for bruk, men langvarig overvåking er nødvendig for å avdekke de faktiske miljøkonsentrasjoner og - effekter etter forskriftsmessig bruk av plantevernmidler. Sveriges nasjonale miljøovervåkingsprogram for plantevernmidler startet i 2002. Hovedmålet med programmet er å følge langtidstrender i påvirkningen av jordbrukets plantevernmiddelbruk på kvaliteten av overflate- og grunnvann, samt å bestemme miljøkonsentrasjonene av plantevernmidler i sediment, luft og nedbør. Formålet med denne evalueringen var å vurdere styrker og svakheter ved overvåkingsprogrammet, samt behov for endringer i den praktiske gjennomføringen, rapporteringsprosedyrer og målsetningen med programmet. Denne evalueringen vurderer også behovene hos de aktuelle sluttbrukergruppene for programmet som inkluderer svensk landbruks- og miljøforvaltning, rådgivningstjenesten i landbruket, bønder og bondeorganisasjoner mv.
Authors
Sophie Mentzel Merete Grung Knut-Erik Tollefsen Marianne Stenrød Roger Holten S. Jannicke MoeAbstract
In Northern Europe, future changes in land-use and weather patterns are expected to result in increased precipitation and temperature this may cause an increase in plant disease and insect pests. In addition, predicted population increase will change the production demands and in turn alter agricultural practices such as crop types and with that the use pattern of pesticides. Considering these variabilities and magnitudes of pesticide exposure to the aquatic environment still needs to be accounted for better in current probabilistic risk assessment. In order to improve ecological risk assessment, this study explores an alternative approach to probabilistic risk assessment using a Bayesian Network, as these can serve as meta-models that link selected input and output variables from other models and information sources. The developed model integrates variability in both exposure and effects in the calculation of risk estimate. We focus on environmental risk of pesticides in two Norwegian case study region representatives of northern Europe. Using pesticide fate and transport models (e.g. WISPE), environmental factors such as soil and site parameters together with chemical properties and climate scenarios (current and predicted) are linked to the exposure of a pesticide in the selected study area. In the long term, the use of tools based on Bayesian Network models will allow for a more refined assessment and targeted management of ecological risks by industry and policy makers.
Authors
Ian K. Toth Marie-anne Barny May Bente Brurberg Guy Condemine Robert Czajkowski John G. Elphinstone Valérie Helias Steven B. Johnson Lucy N. Moleleki Minna Pirhonen Simeon Rossmann Leah Tsror Jacquie E. van der Waals Jan M. van der Wolf Frédérique Van Gijsegem Iris YedidiaAbstract
The soft rot Pectobacteriaceae (SRP) infect a wide range of plants worldwide and cause economic damage to crops and ornamentals but can also colonize other plants as part of their natural life cycle. They are found in a variety of environmental niches, including water, soil and insects, where they may spread to susceptible plants and cause disease. In this chapter, we look in detail at the plants colonized and infected by these pathogens and at the diseases and symptoms they cause. We also focus on where in the environment these organisms are found and their ability to survive and thrive there. Finally, we present evidence that SRP may assist the colonization of human enteric pathogens on plants, potentially implicating them in aspects of human/animal as well as plant health.
Authors
Eris Aas Bakketeig Steven Ray Haakon Wilson Elsa Lundanes Henriette Engen Berg Christine Olsen Leon Reubsaet Tuula Anneli Nyman Bernd ThiedeAbstract
No abstract has been registered
Authors
Beatrix Alsanius Christer Magnusson Mogens Nicolaisen Sandra A.I. Wright Per Hans Micael Wendell Paal Krokene Johan Stenberg Iben Margrete Thomsen Trond RafossAbstract
Key words: VKM, risk assessment, Norwegian Scientific Committee for Food and Environment, Norwegian Food Safety Authority, Norwegian Environment Agency, Biowaste, Compost, Plant health, organic waste, Phytosanitary safety, Biogas, Alien organisms Introduction The Norwegian Food Safety Authority (NFSA) and the Norwegian Environment Agency (NEA) have jointly asked the Norwegian Scientific Committee for food and environment for an assessment into treatment methods and validation methods for compost and digestate based on organic waste in relation to plant health and the spread of harmful alien organisms in Norway. The Norwegian Food Safety Authority will use the report in its supervisory work over companies that produce compost and digestate. The assessment will also provide important input for the regulatory development of several current regulations including regulations on indicator organisms that are used to validate new methods and ensure adequate security with regards to the survival of plant pests. The Norwegian Environment Agency wants to establish whether the methods used in the composting of garden waste and other types of plant waste today are able to ensure that the finished product does not become a source for the spread of harmful alien organisms. This will form the basis for the Norwegian Environment Agency’s guidelines relating to the precautionary provisions in the regulation on alien organisms. This request is limited to an assessment of plant pests and harmful alien organisms (hereinafter alien organisms). The survival of infectious diseases harmful to people and animals is considered in separate assessments. Methods We have conducted initiating workshops for identifying relevant fundamental processes and parameters, of relevant organisms and of relevant search terms for the literature surveys, as well as for discussion and validation. Visits to composting facilities and contact with stakeholders in Norway were also conducted. This information was further implemented in an extensive literature search. This assessment include/encompass organic waste and other materials that are currently treated in biogas and composting facilities, including garden and park waste (incl. soil), plant waste from garden centres, etc., food waste and waste from the food and animal feed industry (including grain/seed husks and waste from enterprises which package and process potatoes and vegetables), manure, bulking agents used in composting facilities, and husks from contracted grain/seed cleaners for sowing. We have used a quantitative risk assessment. The level of confidence in the risk assessment is described, and uncertainties and data gaps identified. Furthermore, we have used re-submission commenting and external expert reviewing before final approval and publication. ...........