Publikasjoner
NIBIOs ansatte publiserer flere hundre vitenskapelige artikler og forskningsrapporter hvert år. Her finner du referanser og lenker til publikasjoner og andre forsknings- og formidlingsaktiviteter. Samlingen oppdateres løpende med både nytt og historisk materiale. For mer informasjon om NIBIOs publikasjoner, besøk NIBIOs bibliotek.
2021
Sammendrag
Det er ikke registrert sammendrag
Sammendrag
Det er ikke registrert sammendrag
2020
Forfattere
Paul Eric Aspholm Kristin Forfang Cornelya Klutsch Ida Marie Luna Fløystad Vilde Rushfeldt Beddari Inger Søvik Beate Banken Bakke Tommi Nyman Snorre HagenSammendrag
Det er ikke registrert sammendrag
Forfattere
Claire R. Peart Sergio Tusso Saurabh D. Pophaly Fidel Botero-Castro Chi-Chih Wu David Aurioles-Gamboa Amy B. Baird John W. Bickham Jaume Forcada Filippo Galimberti Neil J. Gemmell Joseph I. Hoffman Kit M. Kovacs Mervi Kunnasranta Christian Lydersen Tommi Nyman Larissa Rosa de Oliveira Anthony J. Orr Simona Sanvito Mia Valtonen Aaron B. A. Shafer Jochen B. W. WolfSammendrag
The effective size of a population (Ne), which determines its level of neutral variability, is a key evolutionary parameter. Ne can substantially depart from census sizes of present-day breeding populations (NC) as a result of past demographic changes, variation in life-history traits and selection at linked sites. Using genome-wide data we estimated the long-term coalescent Ne for 17 pinniped species represented by 36 population samples (total n = 458 individuals). Ne estimates ranged from 8,936 to 91,178, were highly consistent within (sub)species and showed a strong positive correlation with NC (R2adj = 0.59; P = 0.0002). Ne/NC ratios were low (mean, 0.31; median, 0.13) and co-varied strongly with demographic history and, to a lesser degree, with species’ ecological and life-history variables such as breeding habitat. Residual variation in Ne/NC, after controlling for past demographic fluctuations, contained information about recent population size changes during the Anthropocene. Specifically, species of conservation concern typically had positive residuals indicative of a smaller contemporary NC than would be expected from their long-term Ne. This study highlights the value of comparative population genomic analyses for gauging the evolutionary processes governing genetic variation in natural populations, and provides a framework for identifying populations deserving closer conservation attention.
Forfattere
Simo Maduna Adam Vivian-Smith Ólöf Dóra Bartels Jónsdóttir Albert Imsland Cornelya Klutsch Tommi Nyman Hans Geir Eiken Snorre HagenSammendrag
The lumpfish Cyclopterus lumpus is commercially exploited in numerous areas of its range in the North Atlantic Ocean, and is important in salmonid aquaculture as a biological agent for controlling sea lice. Despite the economic importance, few genetic resources for downstream applications, such as linkage mapping, parentage analysis, marker-assisted selection (MAS), quantitative trait loci (QTL) analysis, and assessing adaptive genetic diversity are currently available for the species. Here, we identify both genome- and transcriptome-derived microsatellites loci from C. lumpus to facilitate such applications. Across 2,346 genomic contigs, we detected a total of 3,067 microsatellite loci, of which 723 were the most suitable ones for primer design. From 116,555 transcriptomic unigenes, we identified a total of 231,556 microsatellite loci, which may indicate a high coverage of the available STRs. Out of these, primer pairs could only be designed for 6,203 loci. Dinucleotide repeats accounted for 89 percent and 52 percent of the genome- and transcriptome-derived microsatellites, respectively. The genetic composition of the dominant repeat motif types showed differences from other investigated fish species. In the genome-derived microsatellites AC/GT (67.8 percent), followed by AG/CT (15.1 percent) and AT/AT (5.6 percent) were the major motifs. Transcriptome-derived microsatellites showed also most dominantly the AC/GT repeat motif (33 percent), followed by A/T (26.6 percent) and AG/CT (11 percent). Functional annotation of microsatellite-containing transcriptomic sequences showed that the majority of the expressed sequence tags encode proteins involved in cellular and metabolic processes, binding activity and catalytic reactions. Importantly, STRs linked to genes involved in immune system process, growth, locomotion and reproduction were discovered in the present study. The extensive genomic marker information reported here will facilitate molecular ecology studies, conservation initiatives and will benefit many aspects of the breeding programmes of C. lumpus.
2019
Forfattere
Tommi Nyman Renske E Onstein Daniele Silvestro Saskia Wutke Andreas Taeger Niklas Wahlberg Stephan Martin Blank Tobias MalmSammendrag
The insect order Hymenoptera originated during the Permian nearly 300 Mya. Ancestrally herbivorous hymenopteran lineages today make up the paraphyletic suborder ‘Symphyta’, which encompasses c. 8200 species with very diverse host-plant associations. We use phylogeny-based statistical analyses to explore the drivers of diversity dynamics within the ‘Symphyta’, with a particular focus on the hypothesis that diversification of herbivorous insects has been driven by the explosive radiation of angiosperms during and after the Cretaceous. Our ancestral-state estimates reveal that the first symphytans fed on gymnosperms, and that shifts onto angiosperms and pteridophytes – and back – have occurred at different time intervals in different groups. Trait-dependent analyses indicate that average net diversification rates do not differ between symphytan lineages feeding on angiosperms, gymnosperms or pteridophytes, but trait-independent models show that the highest diversification rates are found in a few angiosperm-feeding lineages that may have been favoured by the radiations of their host taxa during the Cenozoic. Intriguingly, lineages-through-time plots show signs of an early Cretaceous mass extinction, with a recovery starting first in angiosperm-associated clades. Hence, the oft-invoked assumption of herbivore diversification driven by the rise of flowering plants may overlook a Cretaceous global turnover in insect herbivore communities during the rapid displacement of gymnosperm- and pteridophyte-dominated floras by angiosperms.
Forfattere
Cornelya Klutsch Vetle Schwensen Lindgren Thrond Oddvar Haugen Natalia Polikarpova Paul Eric Aspholm Ida Marie Luna Fløystad Kristin Forfang Simo Maduna Tommi Nyman Hans Geir Eiken Per-Arne Amundsen Snorre HagenSammendrag
Det er ikke registrert sammendrag
Forfattere
Cornelya Klutsch Vetle Schwensen Lindgren Simo Maduna Natalia Polikarpova Tommi Nyman Paul Eric Aspholm Kristin Forfang Per-Arne Amundsen Thrond Oddvar Haugen Hans Geir Eiken Snorre HagenSammendrag
Det er ikke registrert sammendrag
Forfattere
Cornelya Klutsch Vetle Schwensen Lindgren Simo Maduna Natalia Polikarpova Tommi Nyman Kristin Forfang Paul Eric Aspholm Per-Arne Amundsen Thrond Oddvar Haugen Hans Geir Eiken Snorre HagenSammendrag
Det er ikke registrert sammendrag
Forfattere
Cornelya Klutsch Simo Maduna Natalia Polikarpova Kristin Forfang Paul Eric Aspholm Tommi Nyman Hans Geir Eiken Per-Arne Amundsen Snorre HagenSammendrag
Source at <a href=https://doi.org/10.1002/ece3.5191>https://doi.org/10.1002/ece3.5191</a>.