Publikasjoner
NIBIOs ansatte publiserer flere hundre vitenskapelige artikler og forskningsrapporter hvert år. Her finner du referanser og lenker til publikasjoner og andre forsknings- og formidlingsaktiviteter. Samlingen oppdateres løpende med både nytt og historisk materiale. For mer informasjon om NIBIOs publikasjoner, besøk NIBIOs bibliotek.
2018
Authors
Erling Stubhaug Arne Wagle Sigbjørn Leidal Tor Anton Guren Ninni ChristiansenAbstract
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Abstract
Fusarium head blight and seedling blight, both caused by Fusarium spp. and Microdochium spp., and glume blotch caused by Parastagonospora nodorum, are important diseases in wheat. In Norway, wheat seed lots are routinely analysed for infestation by these pathogens using traditional methods (plating grain on PDA, recording presence or absence of fungal colonies). This method is time consuming, require knowledge within fungal morphology, and do not facilitate identification to species in all cases. Molecular methods such as quantitative PCR (qPCR) could allow detection and quantification of fungal DNA at the species level in a relatively time effective way, particularly since the method allows for automation in different steps such as DNA extraction and pipetting. Whether the latter method is suitable within seed health evaluations will depend on the relationship between the amount of DNA of the different fungal species and field performance, and the purpose of the test (evaluation of planting value, need for seed treatment, survey of fungal species, quality of grain for consumption etc). To compare the two different methods, about 150 spring wheat seed lots from the years 2016-2017 (including two cultivars) were selected for the analysis of different fungi using species-specific qPCR and compared with the results from routine testing on PDA. In the 2016 material (81 samples), a mean seed infestation rate of 26% was observed for Microdochium spp. in the PDA test. The level of Fusarium was lower (mean infestation rate of 5%). A strong relationship was observed between the percentage of seeds infested by Microdochium and the level of Microdochium DNA (sum of DNA from Microdochium majus and Microdochium nivale) quantified by qPCR (R2 of 0.76, p<0.01). The relationship between Fusarium infested seeds and the level of Fusarium DNA (sum of DNA from three species) was moderate (R2 of 0.33, p<0.01). The samples were also analysed for the presence of P. nodorum. Compared to Fusarium and Microdochium, P. nodorum was present at an intermediate level (mean infestation rate of 12%). The relationship between the two different methods was weaker for this fungus (R2 of 0.21, p<0.01) than for Fusarium and Microdochium. The relationship between germination capacity and rating of the three groups of fungi by either method was studied. Preliminary results suggest that of the three fungi, Microdochium was associated with germination capacity in the 2016 material, and that the Microdochium infestation rate on PDA was slightly better correlated to germination capacity than the level of Microdochium DNA. Further results will be presented at the conference, including the association between the relative DNA content of the different Microdochium and Fusarium species and seed germination.
Authors
Kris Verheyen Martin Bažány Ewa Chećko Markéta Chudomelová Déborah Closset-Kopp Patryk Czortek Guillaume Decocq Pieter De Frenne Luc De Keersmaeker Cecilia Enriquez Garcia Martina Fabšičová John-Arvid Grytnes Lucia Hederová Radim Hédl Thilo Heinken Fride Høistad Schei Soma Horváth Bogdan Jaroszewicz Edyta Jermakowicz Terezá Klinerova Jens Kolk Martin Kopecký Iwona Kuras Jonathan Lenoir Martin Macek František Máliš Tone Constance Martinessen Tobias Naaf László Papp Ágnes Papp-Szákaly Paweł Pech Petr Petřík Jindřich Prach Kamila Reczýnska Magne Sætersdal Fabien Spicher Tibor Standovár Krzysztof Świerkosz Ewa Szczęśniak Zoltán Tóth Karol Ujházy Mariana Ujházyová Pieter Vangansbeke Ondřej Vild Dan Wołkowycki Monika Wulf Lander BaetenAbstract
Aim: Revisits of non-permanent, relocatable plots first surveyed several decades ago offer a direct way to observe vegetation change and form a unique and increasingly used source of information for global change research. Despite the important insights that can be obtained from resurveying these quasi-permanent vegetation plots, their use is prone to both observer and relocation errors. Studying the combined effects of both error types is important since they will play out together in practice and it is yet unknown to what extent observed vegetation changes are influenced by these errors. Methods: We designed a study that mimicked all steps in a resurvey study and that allowed determination of the magnitude of observer errors only vs the joint observer and relocation errors. Communities of vascular plants growing in the understorey of temperate forests were selected as study system. Ten regions in Europe were covered to explore generality across contexts and 50 observers were involved, which deliberately differed in their experience in making vegetation records. Results: The mean geographic distance between plots in the observer+relocation error data set was 24 m. The mean relative difference in species richness in the observer error and the observer+relocation data set was 15% and 21%, respectively. The mean “pseudo-turnover” between the five records at a quasi-permanent plot location was on average 0.21 and 0.35 for the observer error and observer+relocation error data sets, respectively. More detailed analyses of the compositional variation showed that the nestedness and turnover components were of equal importance in the observer data set, whereas turnover was much more important than nestedness in the observer+relocation data set. Interestingly, the differences between the observer and the observer+relocation data sets largely disappeared when looking at temporal change: both the changes in species richness and species composition over time were very similar in these data sets. Conclusions: Our results demonstrate that observer and relocation errors are nonnegligible when resurveying quasi-permanent plots. A careful interpretation of the results of resurvey studies is warranted, especially when changes are assessed based on a low number of plots. We conclude by listing measures that should be taken to maximally increase the precision and the strength of the inferences drawn from vegetation resurveys.
Authors
Johannes Deelstra Sekhar Udaya Nagothu Krishna R. Kakumanu Yella R. Kaluvai Surresh R. KallamAbstract
Saving water in irrigated agriculture is a high priority in areas with scarce water resources and impacted by climate change. This paper presents results of measurements on water Productivity (WP) under alternative rice growing practices such as alternating wetting and drying,direct seeded rice, modified systems of rice intensification and conventional paddy rice (NI)in two selected districts (Guntur in Andhra Pradesh and Nalgonda in Telangana, India). Under alternative practices, the yields varied from 5.72 to 6.11 t/ha compared with 4.71 t/ha under paddy rice. The average water application varied from 991 to 1494 mm under alternative practices while average application in conventional paddy rice was 2242 mm. Higher yield and lower water application led to an increase in WP varying from 0.45 to 0.59 kg/m3 under alternative practices compared with 0.22 kg/m3 under conventional paddy rice. The measurements showed that less water can be used to produce more crop under alternative rice growing practices. The results are important for water-scarce areas, providing useful information to policy makers, farmers, agricultural departments and water management boards in devising future climate-smart adaptation and mitigation strategies.
Abstract
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Abstract
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Authors
Tor MykingAbstract
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Abstract
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Abstract
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Authors
C. Rikard Unelius S Ganji Christian Schiebe Tao Zhao Anna-Karin Borg-Karlson Bjørn Bohman Philip Weinstein Paal KrokeneAbstract
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