Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2021
Authors
Bikal Ghimire Marcia Saraiva Christian B. Andersen Anupam Gogoi Mona Saleh Nicola Zic Pieter van West May Bente BrurbergAbstract
Oomycetes are spore-forming eukaryotic microbes responsible for infections in animal and plant species worldwide, posing a threat to natural ecosystems, biodiversity and food security. Genomics and transcriptomics approaches, together with host interaction studies, give promising results towards better understanding of the infection mechanisms in oomycetes and their general biology. Significant development and progress in oomycetes genomic studies have been achieved over the past decades but further understanding of molecular processes, gene regulations and infection mechanisms are still needed. The use of molecular tools such as CRISPR/Cas and RNAi helped elucidate some of the molecular processes involved in host invasion and infection both in plant and animal pathogenic oomycetes. These methods provide an opportunity for accurate and detailed functional analysis involving various fields of studies such as genomics, epigenomics, proteomics, and interactomics. Functional gene characterisation is essential for filling the knowledge gaps in dynamic biological processes. However, every method has both advantages and limitations that should be considered before choosing the best method for investigating a particular research question. Here we review transformation systems, gene silencing and gene editing techniques in oomycetes, how they function, in which species and what are their main advantages and disadvantages.
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Authors
J. Julio Camarero Antonio Gazol Gabriel Sangüesa-Barreda Marta Vergarechea Raquel Alfaro-Sánchez Nicolas Cattaneo Sergio M. Vicente-SerranoAbstract
Background Equatorward, rear-edge tree populations are natural monitors to estimate species vulnerability to climate change. According to biogeographical theory, exposition to drought events increases with increasing aridity towards the equator and the growth of southern tree populations will be more vulnerable to drought than in central populations. However, the ecological and biogeographical margins can mismatch due to the impact of ecological factors (topography, soils) or tree-species acclimation that can blur large-scale geographical imprints in trees responses to drought making northern populations more drought limited. Methods We tested these ideas in six tree species, three angiosperms (Fagus sylvatica, Quercus robur, Quercus petraea) and three gymnosperms (Abies alba, Pinus sylvestris and Pinus uncinata) by comparing rear-edge tree populations subjected to different degrees of aridity. We used dendrochronology to compare the radial-growth patterns of these species in northern, intermediate, and southern tree populations at the continental rear edge. Results and conclusions We found marked variations in growth variability between species with coherent patterns of stronger drought signals in the tree-ring series of the southern populations of F. sylvatica, P. sylvestris, and A. alba. This was also observed in species from cool-wet sites (P. uncinata and Q. robur), despite their limited responsiveness to drought. However, in the case of Q. petraea the intermediate population showed the strongest relationship to drought. For drought-sensitive species as F. sylvatica and P. sylvestris, southern populations presented more variable growth which was enhanced by cool-wet conditions from late spring to summer. We found a trend of enhanced vulnerability to drought in these two species. The response of tree growth to drought has a marked biogeographical component characterized by increased drought sensitivity in southern populations even within the species distribution rear edge. Nevertheless, the relationship between tree growth and drought varied between species suggesting that biogeographical and ecological limits do not always overlap as in the case of Q. petraea. In widespread species showing enhanced vulnerability to drought, as F. sylvatica and P. sylvestris, increased vulnerability to climate warming in their rear edges is forecasted. Therefore, we encourage the monitoring and conservation of such marginal tree populations.
Authors
Ishita AhujaAbstract
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Authors
Lars Högbom Dalia Abbas Kestutis Armolaitis Endijs Baders Martyn Futter Aris Jansons Kalev Jõgiste Andis Lazdins Diana Lukmine Mika Mustonen Knut Øistad Anneli Poska Pasi Rautio Johan Svensson Floor Vodde Iveta Varnagiryte-Kabasinskiene Jan Weslien Lars Wilhelmsson Daiga ZuteAbstract
Forests are the dominant land cover in Nordic–Baltic countries, and forestry, the management of forests for improved ecosystem-service (ES) delivery, is an important contributor to sustainability. Forests and forestry support multiple United Nations Sustainability Goals (UN SDGs) and a number of EU policies, and can address conflicting environmental goals. Forests provide multiple ecosystem services and natural solutions, including wood and fibre production, food, clear and clean water and air, animal and plant habitats, soil formation, aesthetics, and cultural and social services. Carbon sequestered by growing trees is a key factor in the envisaged transition from a fossil-based to a biobased economy. Here, we highlight the possibilities of forest-based solutions to mitigate current and emerging societal challenges. We discuss forestry effects on forest ecosystems, focusing on the optimisation of ES delivery and the fulfilment of UN SDGs while counteracting unwanted effects. In particular, we highlight the trilemma of (i) increasing wood production to substitute raw fossil materials, (ii) increasing forest carbon storage capacity, and (iii) improving forest biodiversity and other ES delivery.
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Authors
Trygve S. AamlidAbstract
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Understanding the quality of new raw material sources will be of great importance to ensure the development of a circular bioeconomy. Building up quality understanding of wood waste is an important step in this development. In this paper we probe two main questions, one substantial and one theoretical: What different understandings of wood waste quality exist and what significance do they have for the recycling and re-use of this waste fraction? And, what is the evolution of knowledge and sustainable practices of wood waste qualities a case of? The analysis is based on diverse perspectives and forms of methods and empirical material. Studies of policy documents, regulations, standards, etc. have been reviewed to uncover what kind of measures and concepts that have been important for governing and regulating wood waste handling. Interviews concerning wood and wood waste qualities have been conducted with key informants and people visiting recycling and waste management stations in Oslo and Akershus in Norway. By studying quality conceptions through the social birth, production, life, end-of-life and re-birth of wood products, we analyse socio-cultural conditions for sustainability. Furthermore we show how the evolution of knowledge and sustainable practices of wood waste qualities, in the meeting with standards and regulations, is a case of adaptation work in the evolution of Norwegian bioeconomy.
Authors
Atle Wehn HegnesAbstract
No abstract has been registered