Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2024
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Here, we present, for the first time, the Ion TorrentⓇ next-generation sequencing (NGS) data for five houndsharks (Chondrichthyes: Triakidae), which include Galeorhinus galeus (number of bases pairs (bp) 17,487; GenBank accession number ON652874), Mustelus asterias (16,708; ON652873), Mustelus mosis (16,755; ON075077), Mustelus palumbes (16,708; ON075076), and Triakis megalopterus (16,746; ON075075). All assembled mitogenomes encode 13 protein-coding genes (PCGs), two ribosomal (r)RNA genes, and 22 transfer (t)RNA genes (tRNALeu and tRNASer are duplicated), except for G. galeus which contains 23 tRNA genes where tRNAThr is duplicated. The data presented in this paper can assist other researchers in further elucidating the diversification of triakid species and the phylogenetic relationships within Carcharhiniformes (groundsharks) as mitogenomes accumulate in public repositories.
Authors
Daniele Prodorutti Riccardo Bugiani Vincent Philion Arne Stensvand Emanuela Coller Clelia Tosi Claudio Rizzi Gino Angeli Ilaria PertotAbstract
Trials were carried out in apple orchards of Emilia-Romagna and Trentino-Alto Adige in northern Italy to investigate the effects of sprinkler irrigation on possible reduction in inoculum and subsequent disease pressure of Venturia inaequalis, the ascomycete causing apple scab. In spring, volumetric spore traps were placed above apple leaf litter containing pseudothecia with ascospores of the fungus. Pseudothecia matured more rapidly in irrigated plots, and 95% of the total number of spores trapped in a season was reached on average 164 degree days (base temperature 0°C) earlier in irrigated compared with nonirrigated plots. On average for seven location/year combinations, more than 50% of the ascospores were trapped following irrigations carried out for 2 h on sunny days before a forecasted rainfall. Subsequently, a much lower number of spores were trapped on rainy days following irrigation. Field trials with scab-susceptible apple cultivars were carried out in the two regions to evaluate the efficacy of sprinkler irrigation on disease. Irrigated and nonirrigated plots were either treated with different fungicide control strategies or not treated. Irrigation significantly reduced the incidence of apple scab at both sites, and the overall number of infected leaves and fruit was reduced by more than 50%. Midday sprinkler irrigation can significantly reduce the inoculum pressure of V. inaequalis in apple orchards. This may be a sustainable management strategy, especially in areas with extended dry periods.
Abstract
We document the presence of Schistidium marginale (Grimmiaceae) in Trollheimen, central Norway. The sequence of the nuclear ITS region aligns identically with an accession from the Caucasus, distinct from Alpine accessions. This may suggest post-glacial colonization originating from south-eastern rather than southern populations. The new locality exhibited only a few tufts and shared habitat similarities with Alpine locations, albeit with a potentially more base-rich substrate.
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No abstract has been registered
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Authors
Arne StensvandAbstract
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Authors
Thomas Pabst Attila Nemes Andreas Olaus Harstad Ann-Cathrin Stridal Marie Wagner Gudny OkkenhaugAbstract
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Authors
Kate L. Wootton F. Guillaume Blanchet Andrew Liston Tommi Nyman Laura G. A. Riggi Jens-Peter Kopelke Tomas Roslin Dominique GravelAbstract
Who interacts with whom is a key question in community and network ecology. The concept that these interactions may be driven by a match between the traits of consumer and resource species is known as trait-matching. If trait-matching would allow for general predictions of interaction structure based on sufficiently few and easily-measurable traits, then this approach could replace the laborious description of each individual pairwise interaction. To resolve imprints of trait-matching in a species-rich tri-trophic Salix–galler–parasitoid network, and to identify the most relevant traits, we applied five different methods, each approaching the same phenomenon from a different perspective. As traits, we used, body sizes, gall type (position on plant, structure of gall) and phenology, among others, as well as phylogenetic proxies. When jointly applied, the methods demonstrate distinctly different imprints of traits within the two bipartite network elements (Salix–galler versus galler–parasitoid interactions). Of the galler–parasitoid sub-network's interactions, approximately half were explainable by the species traits used; of the Salix–galler sub-network's interactions, traits explained at most two-fifths. Gall type appeared to be the most important structuring trait in both networks. Phylogeny explained as much, or more than did our tested traits, suggesting that traits may be conserved and phylogeny therefore an effective proxy. Overall, the more specialized structure of the Salix–galler network versus the more nested structure of the galler–parasitoid network meant that different methods were more effective at capturing interactions and interaction structure in the different sub-networks. Thus, our analysis reveals how structuring impacts may vary even between levels within the same multitrophic network, and calls for comparative analyses of trait matching across a wide set of systems and methods.