Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2022
Abstract
Heat Field Deformation (HFD) is a widely used method to measure sap flow of trees based on empirical relationships between heat transfer within tree stems and the sap flow rates. As an alternative, the Linear Heat Balance (LHB) method implements the same instrumental configuration as HFD but calculates the sap flow rates using analytical equations that are derived from fundamental conduction-convection heat transfer theories. In this study, we systematically compared the sap flow calculated using the two methods based on data that were recorded using the same instrument. The measurements were conducted on four Norway spruce trees. We aimed to evaluate the discrepancies between the sap flow estimates from the two methods and determine the underlying causes. Diurnal and day-to-day patterns were consistent between the sap flow estimates from the two methods. However, the magnitudes of the estimated sap flow were different between them, where LHB resulted in much lower estimates in three trees and slightly higher estimates in one compared to HFD. We also observed larger discrepancies in negative (reversed flow) than in positive sap flow, where the LHB resulted in lower reversed flow than HFD. Consequently, the seasonal budget estimated by LHB can be as low as ∼20% of that estimated by HFD. The discrepancies can be mainly attributed to the low wood thermal conductivities for the studied trees that lead to substantial underestimations using the LHB method. In addition, the sap flow estimates were very sensitive to the value changes of the empirical parameters in the calculations and, thus, using a proper case-specific value is recommended, especially for the LHB method. Overall, we suggest that, despite the strong theoretical support, the correctness of LHB outputs depends largely on the tree individuals and should be carefully evaluated.
Abstract
As a way to estimate evapotranspiration (ET), Heat Field Deformation (HFD) is a widely used method to measure sap flow of trees based on empirical relationships between heat transfer within tree stems and the sap flow rates. As an alternative, the Linear Heat Balance (LHB) method implements the same instrumental configuration as HFD but calculates the sap flow rates using analytical equations that are derived from fundamental conduction-convection heat transfer equations.
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Authors
Joyce Machado Nunes Romeiro Tron Haakon Eid Clara Antón Fernández Annika Kangas Erik TrømborgAbstract
It is expected that European Boreal and Temperate forests will be greatly affected by climate change, causing natural disturbances to increase in frequency and severity. To detangle how, through forest management, we can make forests less vulnerable to the impact of natural disturbances, we need to include the risks of such disturbances in our decision-making tools. The present review investigates: i) how the most important forestry-related natural disturbances are linked to climate change, and ii) different modelling approaches that assess the risks of natural disturbances and their applicability for large-scale forest management planning. Global warming will decrease frozen soil periods, which increases root rot, snow, ice and wind damage, cascading into an increment of bark beetle damage. Central Europe will experience a decrease in precipitation and increase in temperature, which lowers tree defenses against bark beetles and increases root rot infestations. Ice and wet snow damages are expected to increase in Northern Boreal forests, and to reduce in Temperate and Southern Boreal forests. However, lack of snow cover may increase cases of frost-damaged seedlings. The increased temperatures and drought periods, together with a fuel increment from other disturbances, likely enhance wildfire risk, especially for Temperate forests. For the review of European modelling approaches, thirty-nine disturbance models were assessed and categorized according to their required input variables and to the models’ outputs. Probability models are usually common for all disturbance model approaches, however, models that predict disturbance effects seem to be scarce.
Authors
Sunil Mundra Håvard Kauserud Tonje Økland Jørn-Frode Nordbakken Yngvild Eidissen Ransedokken O. Janne KjønaasAbstract
The replacement of native birch with Norway spruce has been initiated in Norway to increase long-term carbon storage in forests. However, there is limited knowledge on the impacts that aboveground changes will have on the belowground microbiota. We examined which effects a tree species shift from birch to spruce stands has on belowground microbial communities, soil fungal biomass and relationships with vegetation biomass and soil organic carbon (SOC). Replacement of birch with spruce negatively influenced soil bacterial and fungal richness and strongly altered microbial community composition in the forest floor layer, most strikingly for fungi. Tree species-mediated variation in soil properties was a major factor explaining variation in bacterial communities. For fungi, both soil chemistry and understorey vegetation were important community structuring factors, particularly for ectomycorrhizal fungi. The relative abundance of ectomycorrhizal fungi and the ectomycorrhizal : saprotrophic fungal ratio were higher in spruce compared to birch stands, particularly in the deeper mineral soil layers, and vice versa for saprotrophs. The positive relationship between ergosterol (fungal biomass) and SOC stock in the forest floor layer suggests higher carbon sequestration potential in spruce forest soil, alternatively, that the larger carbon stock leads to an increase in soil fungal biomass.
Abstract
No abstract has been registered
Authors
Nina Elisabeth Nagy Hans Ragnar Norli Monica Fongen Runa Berg Østby Inger Heldal Jahn Davik Ari HietalaAbstract
Tree defense against xylem pathogens involves both constitutive and induced phenylpropanoids and terpenoids. The induced defenses include compartmentalization of compromised wood with a reaction zone (RZ) characterized by polyphenol deposition, whereas the role of terpenoids has remained poorly understood. To further elucidate the tree–pathogen interaction, we profiled spatial patterns in lignan (low-molecular-weight polyphenols) and terpenoid content in Norway spruce (Picea abies) trees showing heartwood colonization by the pathogenic white-rot fungus Heterobasidion parviporum. There was pronounced variation in the amount and composition of lignans between different xylem tissue zones of diseased and healthy trees. Intact RZ at basal stem regions, where colonization is the oldest, showed the highest level and diversity of these compounds. The antioxidant properties of lignans obviously hinder oxidative degradation of wood: RZ with lignans removed by extraction showed significantly higher mass loss than unextracted RZ when subjected to Fenton degradation. The reduced diversity and amount of lignans in pathogen-compromised RZ and decaying heartwood in comparison to intact RZ and healthy heartwood suggest that α-conindendrin isomer is an intermediate metabolite in lignan decomposition by H. parviporum. Diterpenes and diterpene alcohols constituted above 90% of the terpenes detected in sapwood of healthy and diseased trees. A significant finding was that traumatic resin canals, predominated by monoterpenes, were commonly associated with RZ. The findings clarify the roles and fate of lignan during wood decay and raise questions about the potential roles of terpenoids in signal transduction, synthesis, and translocation of defense compounds upon wood compartmentalization against decay fungi.
Authors
Simo Maduna Adam Vivian-Smith Ólöf Dóra Bartels Jónsdóttir Albert Imsland Cornelya Klutsch Tommi Nyman Hans Geir Eiken Snorre HagenAbstract
We determined the mitogenome of Cyclopterus lumpus using a hybrid sequencing approach, and another four closely related species in the Liparidae based on available next-generation sequence data. We found that the mitogenome of C. lumpus was 17,266 bp in length, where the length and organisation were comparable to those reported for cottoids. However, we found a GC-homopolymer region in the intergenic space between tRNALeu2 and ND1 in liparids and cyclopterids. Phylogenetic reconstruction confirmed the monophyly of infraorders and firmly supported a sister-group relationship between Cyclopteridae and Liparidae. Purifying selection was the predominant force in the evolution of cottoid mitogenomes. There was significant evidence of relaxed selective pressures along the lineage of deep-sea fish, while selection was intensified in the freshwater lineage. Overall, our analysis provides a necessary expansion in the availability of mitogenomic sequences and sheds light on mitogenomic adaptation in Cottoidei fish inhabiting different aquatic environments.