Publikasjoner
NIBIOs ansatte publiserer flere hundre vitenskapelige artikler og forskningsrapporter hvert år. Her finner du referanser og lenker til publikasjoner og andre forsknings- og formidlingsaktiviteter. Samlingen oppdateres løpende med både nytt og historisk materiale. For mer informasjon om NIBIOs publikasjoner, besøk NIBIOs bibliotek.
2010
Sammendrag
Docks are among the most important perennial weeds in grasslands throughout the world and the need for more effective control methods is especially crucial in organic forage production. To find more effective control methods, field trials over 2 years at 4 Norwegian locations, were carried out mainly as a full-factorial design, including factors expected to reduce docks significantly. (i) Date of grassland establishment: may be important for preventing/decreasing the flush of seedlings from seeds as well as shoots from root fragments.(ii) False seedbed preparation: to decrease soil seed bank. (iii) Use of nurse crop (cover crop) to increase competitiveness against Rumex seedlings. (iv) Cutting the taproot, using a rotary tiller before ploughing, or the "dock-plough" (a skimmer modified to cut roots in the entire furrow width at ca 7 cm depth): as new shoots mostly come from the neck and the upper 5 cm of the taproot. (v) Ploughing depth and skimming: to decrease shoots from root fragments. Weed development was assessed as the number of emerging Rumex seedlings and plants sprouting from root fragments. Results indicated that frequently more plants emerged from seeds than from root fragments. Neither renewing the grassland in summer, nor the use of the rotary tiller or the "dock plough" reduced the number of docks in the renewed grasslands. The use of the false seedbed and nurse crop, at some locations and years, reduced the number of docks in the renewed grasslands. Deep ploughing (24cm) reduced the number of Rumex plants from roots by 65% percent compared to shallow ploughing (16cm). Furthermore, the use of a skimmer reduced the number of docks sprouting from roots by 28%. Among the investigated factors, competitiveness, false seedbed and ploughing depth, as well as ploughing quality, seems to be the most promising factors for reducing the number of docks in renewed grassland.
Forfattere
Trygve S. AamlidSammendrag
The plant growth regulator trinexapac-ethyl (TE) has been evaluated in five registration trials in Finland and Norway. In 2007, TE was applied monthly at rates 0.023-0.090 kg a.i. ha-1 in a creeping bentgrass green trial and 0.057-0.339 kg a.i. ha-1 in two bluegrass/fescue fairway trials. Seasonal clipping yield reductions varied from 8 to 21 % in the green trial and from 0 to 25 % in the fairway trials; reductions were usually significant at two, but not at four weeks after application. Phytotoxic effects were observed at rates ≥ 0.113 kg a.i. ha-1 in one of the fairway trials, but TE resulted in less snow mould and faster green-up in 2008 in the other fairway trial and in the green trial. In a new green trial established 2008, weekly or biweekly applications of TE at rates 0.017-0.051 kg a.i. ha-1 reduced clippings by an average of 25 % and increased ball roll distance by an average of 6 %, however, differences among sprayed plots were not significant. In conclusion, we recommend that TE be approved for use on Scandinavian golf courses. Recommeded rates and application intervals are 0.023-0.046 kg a.i. ha-1 every 1-2 weeks on greens and 0.057-0.113 kg a.i. ha-1 every 2-3 weeks on fairways. The lower rates must always be used at the first application.
Forfattere
May Bente Brurberg Xiaoren Chen May Bente Brurberg Sonja KlemsdalSammendrag
The oomycete Phytophthora cactorum causes crown rot in strawberry, resulting in big economic losses. To unravel the molecular mechanisms that are involved in the pathogenicity of P. cactorum on strawberry, two strategies were followed, SSH cDNA library and effector specific differential display (ESDD). Two cDNA libraries were made, enriched for P.cactorum genes upregulated during infection of strawberry or in in vitro germinating cysts (a developmental stage essential for infection). Recent characterization of oomycete AVR/effector genes revealed that they encode proteins with conserved RxLR-dEER motifs required for translocating these effectors into host cells. The presence of such a conserved "tag" has provided a tool for discovering the otherwise structurally diverse effector genes. To select RxLR effector genes from P. cactorum, ESDD was performed on seven cDNA populations including four developmental stages (mycelium, sporangia, zoospores,germinating cysts) as well as three time points during infection (3, 5, 7 days postinoculation),using RxLR and EER primers. Using these strategies more than 230 gene fragments were isolated. Nearly 30 % of the genes could not be assigned a coding function, using sequence similarity-based function prediction, because either no similar sequences were detected or similarities were found only to putative proteins with unknown function (mostly oomycete). However, several genes potentially relevant for pathogenicity, including several putative RxLR effector and elicitor genes were discovered. The expression of 27 of these genes was studied in detail using real-time RT- PCR, and their upregulated expression during infection relative to dispersal propagules (sporangia) were confirmed for all but one.
Forfattere
Jens Rohloff Per Winge Jahn Davik May Bente Brurberg K Mockaitis V Shulaev SK Randall Atle Bones Muath AlsheikhSammendrag
In order to support functional genomics research in octoploid (Fragaria x ananassa Duch.) and diploid (F. vesca) strawberry, a customized Fragaria microarray chip was developed as a joint collaboration between Graminor Breeding Ltd. and NTNU. F. vesca cDNA sequences were provided by The Center for Genomics and Bioinformatics, Indiana University (an assembly of >3 million reads from GS-FLX Titanium - Roche/454 Life Sciences sequencing), and about 59,000 publicly available Fragaria EST sequences were uploaded from NCBI. In addition, ~190 Mb of preliminary draft genome sequences from F. vesca were provided by the Strawberry Genome Sequencing Consortium (courtesy to V. Shulaev). cDNAs used as templates for probe design were validated by BlastN against the F. vesca draft genome excluding cDNAs of microbial origin. Genes not represented in the cDNA collection were identified by screening F. vesca draft genome against protein sequences from Arabidopsis thaliana, Vitis vinifera, Ricinus communis and Populus trichocarpa. Exon sequences from genes not found in the cDNAs were included. In total, 43723 unique 60-mer probes were designed and the Agilent eARRAY tool was used to produce a 4x44k format microarray chip. Fragaria chip applicability and feasibility for transcriptional profiling was investigated using either abiotic (low temperature) or biotic (pathogenic fungi) stress treatment. Microarray data will be subsequently integrated with other omics data to address gene-regulatory networks and biological functions. Cold acclimation experiments were focused on short- and long-term effects in meristematic tissue, and revealed the up-regulation of ~100 cold-responsive genes (transcription factors, dehydrins, enzymes), and transcripts involved in starch breakdown and raffinose biosynthesis. Beside central metabolism, secondary metabolism was also strongly modulated as seen by changes in the expression of flavonoid biosynthesis-related genes. Time-course studies of transcriptional responses in F. vesca accessions showing contrasting resistance toward the pathogen Phytophthora cactorum are in progress, and will be presented in-depth.
Forfattere
Aslaf Belachew Arne Stensvand Nina Trandem Vitalis Wafula Wekesa Gilberto de Moraes Ingeborg KlingenSammendrag
The co-occurrence of powdery mildew, Podosphaera aphanis, and the two-spotted spider mite, Tetranychus urticae, on strawberry plants requires a strategic use of fungicides to control powdery mildew without harming predatory mites and other beneficial organisms. Sulfur has been used for two centuries to manage powdery mildew and is the only fungicide approved for use in organic strawberry production in Norway. However, there are contrasting reports in the literature about the effect of sulfur on predatory mites and two-spotted spider mite from field studies. Controlled laboratory experiments were therefore conducted on strawberry leaf disks to study the main as well as the interacting effects of sulfur on P. aphanis, T. urticae and the predatory mite, Phytoseiulus persimilis. The following seven treatment combinations: 1) Sulfur + P. aphanis 2) Sulfur + T. urticae 3) Sulfur + P. persimilis 4) Sulfur + P.aphanis + P.persimilis 5) Sulfur + P.aphanis + T.urticae 6) Sulfur + P. Persimilis + T.urticae 7) Sulfur + P.aphanis + P.persimilis + T.urticae and seven parallel treatment combinations with water instead of sulfur (control) were used. Leaf disks were dipped in a sulfur (Thiovit Jet) solution or water and inoculated with P. aphanis after the sulfur/ water had dried on the leaf surface. In treatments with mites, five female T. urticae and one female P. persimilis were added per leaf disk. Preliminary analysis of the results showed that only the predatory mite and sulfur significantly (P ≤ 0.05) affected egg production and mortality of T. urticae. In the treatment that combined sulfur + P. aphanis + P. persimilis + T. urticae a significantly reduction in T. urticae egg production was seen. However, there was no significant effect on egg production and mortality of T. urticae in the three-way or two-way interactions of sulfur, powdery mildew and predatory mite. There was no significant effect of sulfur on mortality of P. persimilis, and sulfur did not seem to affect the efficiency of this predatory mite. Powdery mildew did not affect T. urticae probably because the mildew was not well developed due to inoculation at the same time as the mites were added. In another experiment, however, mites were released on leaf disks that had well developed powdery mildew, and here a negative effect of the mildew on T. urticae egg production was clearly seen.
Forfattere
Svein SolbergSammendrag
Four alternative airborne laser scanning (ALS) canopy penetration variables were compared for their suitability for mapping of gap fraction, leaf area index and disturbances in a Scots pine forest. The variables were based on either echo counting or intensity, and on either first or first and last echoes. ALS data and field-measured gap fraction and effective leaf area index (LAIe) were gathered before and after a severe insect defoliation by pine sawflies. LAIe is a commonly used form of leaf area index that is mathematically derived from gap fraction, and includes the areas of foliage, branches and trunks, and which is not corrected for the clumping of foliage. The ALS penetration variables were almost equally strongly related to field-measured gap fraction and LAIe. The estimated slopes in the LAIe models varied from 0.94 to 2.71, and had coefficient of determination R 2 values of 0.92–0.94. They were strongly correlated to each other (R 2 values of 0.95–0.98) and agreed fairly well for temporal changes of LAIe during the summer and the insect defoliation (R 2 values of 0.82–0.95). Counting of first and last echoes produced penetration rates close to the gap fraction, and this penetration variable was able to penetrate tree crowns. Ground-only echoes represented mostly between-tree gaps, and canopy-first-ground-last pulses represented mostly within-canopy gaps. However, the penetration variables based on first and last echoes suffered from the problem that a second echo might be impaired both in low and in tall canopies. In low canopies, two adjacent echoes from the same pulse would be too close in time to be separated by the sensor, while in tall canopies the pulse might apparently be fragmented down through the canopy. The intensity-based penetration variables needed to be supplemented with reflectance values, or at least the ratio between reflectance of the canopy and the ground, and this ratio was estimated from the data. The study demonstrated that one might be able to distinguish between disturbance types, e.g. between defoliation and cutting, by comparing alternative ALS penetration variables. Insect defoliation was dominated by an increase in within-canopy gaps and, correspondingly, the fraction of partly penetrating canopy-first-ground-last pulses. Tree removals from cutting were dominated by increases in between-tree gaps and the corresponding fraction of ground-only pulses.
Forfattere
Nadeem Yaqoob Jan Karlsson Benedicte Riber Albrectsen Halvor Solheim Carl Gunnar FossdalSammendrag
Plants are exposed to a variety of pathogens in their natural habitats. To understand the key processes of defense responses in aspen (Populus tremulae) at the transcript level two clones C72 and C23 with differential level of resistance from the SwAsp collection were inoculated with a foliar rust (Melampsora magnusiana Wagnar). Leaf samples were collected from adjacent areas of the inoculation site to examine the long distance (systemic) defense responses at day1, day3 and day14 post treatments. We performed microarray experiments on the biothrophic interaction, on comparison with the healthy controls we found that the two clones respond in a widely different fashion to the rust. Clone C23 showed almost no response to biotroph after 24 hours while clone 72 gave a clear defense response to the pathogen. Quantitative reverse-transcriptase polymerase chain reaction (qRT-PCR) showed a significant differential expression patterns in susceptible and resistant colnes. Chitinase, cinnamic acid reductase and the iaa genes showed signification up-regulation in resistant clone. The level of expression was 5.9 delta threshold cycles in chitinase gene at day14. Data analysis from extracted total phenolics and condensed tannins verify the results of cDNA arrays and qRT-PCR.
Forfattere
Nicholas Clarke Milan Gryndler Hans-Holger Liste Reiner Schroll Peter Schröder Miroslav MatuchaSammendrag
The halogens, most importantly fluorine, chlorine, bromine, and iodine, occur in nature as ions and compounds, including organic compounds. Halogenated organic substances (haloorganics) were long considered purely anthropogenic products; however, they are in addition a commonly occurring and important part of natural ecosystems. Natural haloorganics are produced largely by living organisms, although abiotic production occurs as well. A survey is given of processes of formation, transport, and degradation of haloorganics in temperate and boreal forests, predominantly in Europe. More work is necessary in order to understand the environmental impact of haloorganics in temperate and boreal forest soils. This includes both further research, especially to understand the key processes of formation and degradation of halogenated compounds, and monitoring of the substances in question in forest ecosystems. It is also important to understand the effect of various forest management techniques on haloorganics, as management can be used to produce desired effects.
Forfattere
Roman Gebauer Josef Urban Isabella Børja Vladimir Gryc H Vavrcik Daniel Volarik Petra RychteckaSammendrag
The drought stress presents a significant threat for the forest ecosystems. The climate change brings some extreme climatic conditions including longer and more common periods of the drought into the still more forest stands. Current forest management and consecutively wood processing industry in the Czech Republic is nowadays dependent mostly on the Norway spruce. In the same hand, Norway spruce is probably the most threatened tree species by the climate change. Therefore there is a demand for the suitable methodology to monitor the direct effect of the drought on the trees. Presented publication puts together different methods of the evaluation of the water stress and tries to assess their value for the study of the water stress. Of course, there are dozen of the methods to study the water stress. In this handbook we skipped the difficult and expensive techniques and focused rather on the simple methods, suitable for the field use. Methodology begins with the description of the meteorological measurements with current widely available instrumental techniques (i.e. measurements of the intensity of global radiation, air temperature and humidity, wind speed and precipitation) and continues with the monitoring of the soil water content and soil water potential. Then there is a focus on the direct effect of the water stress on the plant. We began with the plant root system since we believed that the fine roots were the most susceptible part of the tree. The focus was on their morphology, anatomy and biological activity. In the aboveground part of the tree we focused on the development of the hydraulic architecture of the tree on the microscopic level. This theoretical analysis was validated by the in-situ measurements of the sap flow. Direct and immediate effect of the water stress on the plant water status is described in the means of the plant water potential. Similarly to the hydraulic architecture we dealt with both the xylogenesis (on the cellular level) and the stem increment measured (on the tree level) by the logging band dendrometers. Finally we discussed the effect of the plant water status on the mineral nutrition of the tree. To conclude, none of the methods alone can implicate the complexity of the water stress, however the combination of the different views gives rather good insight on the tree condition and enable to predict the further tree development.
Sammendrag
The increased occurrence of Fusarium toxins during recent years in Norwegian cereals, especially deoxynivalenol (DON) in spring wheat and DON and T-2/HT-2 toxins in oats (see abstract by Hofgaard et al), is a serious challenge for the cereal industry and farmers. Contamination levels above regulatory or advisory maximum limits have frequently been detected. In Norway, many farmers bring their grain directly to the buyer at harvest, and, in a time and cost perspective, it is not realistic to test all grain lots for mycotoxin content by chemical analysis. In order to reduce the risk of cereal grain lots with unacceptable Fusarium toxin content entering the feed and food chain, a three-step screening strategy has been developed in close cooperation with the cereal industry. 1 Toxin risk (DON, T-2/HT-2) in cereal fields will be predicted by models based on information on climatic conditions and agronomic/cultivation practice (see abstract by Elen et al). 2 Grain from "high-risk" fields will be analysed for mycotoxins by a rapid "on-site" test method (lateral flow tests) before the grain enters the silo/storage/mill. 3 Samples from lots with toxin levels close to the defined maximum limits (based on analyses in step 2) can be forwarded to chemical analyses for precise decision of the mycotoxin concentrations.