Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2018
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Authors
Andrew D. Armitage Erik Lysøe Charlotte F. Nellist Laura A. Lewis Liliana M. Cano Richard J. Harrison May Bente BrurbergAbstract
The oomycete pathogen Phytophthora cactorum causes crown rot, a major disease of cultivated strawberry. We report the draft genome of P. cactorum isolate 10300, isolated from symptomatic Fragaria x ananassa tissue. Our analysis revealed that there are a large number of genes encoding putative secreted effectors in the genome, including nearly 200 RxLR domain containing effectors, 77 Crinklers (CRN) grouped into 38 families, and numerous apoplastic effectors, such as phytotoxins (PcF proteins) and necrosis inducing proteins. As in other Phytophthora species, the genomic environment of many RxLR and CRN genes differed from core eukaryotic genes, a hallmark of the two-speed genome. We found genes homologous to known Phytophthora infestans avirulence genes including Avr1, Avr3b, Avr4, Avrblb1 and AvrSmira2 indicating effector sequence conservation between Phytophthora species of clade 1a and clade 1c. The reported P. cactorum genome sequence and associated annotations represent a comprehensive resource for avirulence gene discovery in other Phytophthora species from clade 1 and, will facilitate effector informed breeding strategies in other crops.
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Tuomas Toivanen Olli-Pekka Smolander Carl Gunnar Fossdal Paal Krokene Lars Paulin Petri Auvinen Etienne Bucher Timo HytönenAbstract
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Louise Eriksson Johanna Boberg Thomas L. Cech Tamara Corcobado Marie-Laure Desprez-Loustau Ari Hietala Marilia Horta Jung Thomas Jung Hatice Tugba Dogmus Lehtijarvi Funda Oskay Slavtcho Slavov Halvor Solheim Jan Stenlid Jonas OlivaAbstract
Political action can reduce introductions of diseases caused by invasive forest pathogens (IPs) and public support is important for effective prevention. The public’s awareness of IP problems and the acceptability of policies aiming to combat these pathogens were surveyed in nine European countries (N = 3469). Although awareness of specific diseases (e.g., ash dieback) varied, problem awareness and policy acceptability were similar across countries. The public was positive towards policies for informational measures and stricter standards for plant production, but less positive towards restricting public access to protected areas. Multilevel models, including individual and country level variables, revealed that media exposure was positively associated with awareness of IP problems, and strengthened the link between problem awareness and policy acceptability. Results suggest that learning about IPs through the media and recognizing the associated problems increase policy acceptability. Overall, the study elaborates on the anthropogenic dimension of diseases caused by IPs.
Authors
Arne Stensvand Aruppillai Suthaparan Belachew Asalf Tadesse Rodrigo B. Onofre Pål Johan From Natalia A. Peres W. Turechek Andrew Bierman Mark Rea David M. GadouryAbstract
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Björn Ringselle Therese With Berge Daniel Stout Tor Arvid Breland Paul E. Hatcher Espen Haugland Matthias Koesling Kjell Mangerud Tor Lunnan Lars Olav BrandsæterAbstract
Docks (Rumex spp.) are a considerable problem in grassland production worldwide. We investigated how different cultural management techniques affected dock populations during grassland renewal: (I) renewal time, (II) companion crop, (III) false seedbed, (IV) taproot cutting (V), plough skimmer and (VI) ploughing depth. Three factorial split-split plot experiments were carried out in Norway in 2007–2008 (three locations), 2008–2009 (one location) and 2009 (one location). After grassland renewal, more dock plants emerged from seeds than from roots. Summer renewal resulted in more dock seed and root plants than spring renewal. Adding a spring barley companion crop to the grassland crop often reduced dock density and biomass. A false seedbed resulted in 71% fewer dock seed plants following summer renewal, but tended to increase the number of dock plants after spring renewal. In some instances, taproot cutting resulted in less dock biomass, but the effect was weak and inconsistent, and if ploughing was shallow (16 cm) or omitted, it instead increased dock root plant emergence. Fewer root plants emerged after deep ploughing (24 cm) compared to shallow ploughing, and a plough skimmer tended to reduce the number further. We conclude that a competitive companion crop can assist in controlling both dock seed and root plants, but it is more important that the renewal time is favourable to the main crop. Taproot cutting in conjunction with ploughing is not an effective way to reduce dock root plants, but ploughing is more effective if it is deep and a skimmer is used.