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Publications

NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.

2006

Abstract

We describe the cloning and characterization of a single copy gene from Trichoderma atroviride P1 encoding a novel 30 kDa chitinase, Ech30. Ech30 is a family 18 chitinase showing low sequence similarity to other Trichoderma chitinases. Real-time quantitative RT-PCR studies revealed that expression of the ech30 gene was induced by the presence of Botrytis cinerea in plate confrontation assays, but hardly by chitin in liquid cultures. Studies of Ech30 purified from an Escherichia coli strain overexpressing the ech30 gene devoid of the leader sequence and a predicted intron, showed that the gene encodes an active chitinase, which, as expected for family 18 chitinases, is inhibited by allosamidin.

Abstract

Ecosystems commonly fall under the rubric of complex systems (West and Brown 2004). Nevertheless, in the practical management of certain ecosystems, we encounter simple heuristic rules of human interference that are often derived from cultural traditions rather than from scientific study. The increased technical power of computer-based simulation tools and their increased mathematical formalization may either remove former technical limits (e.g., of prediction) or, in contrast, reveal the fundamental character of some of these limits. Here, we shall argue that both cases occur, and that the main effect of simulation technology is to bring the distinction between these cases into scientific awareness.

Abstract

Most phenomena in ecosystem research are assessed via repeated measurements of environmental variables. The dynamics of these time series is investigated with a variety of statistical techniques; in this article, we focus on modern nonlinear methods. They enable separation of short- and long-term components, show all types of trends and quantify the information contained and the complexity of the data sets.

2005