Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2024
Authors
Kate L. Wootton F. Guillaume Blanchet Andrew Liston Tommi Nyman Laura G. A. Riggi Jens-Peter Kopelke Tomas Roslin Dominique GravelAbstract
Who interacts with whom is a key question in community and network ecology. The concept that these interactions may be driven by a match between the traits of consumer and resource species is known as trait-matching. If trait-matching would allow for general predictions of interaction structure based on sufficiently few and easily-measurable traits, then this approach could replace the laborious description of each individual pairwise interaction. To resolve imprints of trait-matching in a species-rich tri-trophic Salix–galler–parasitoid network, and to identify the most relevant traits, we applied five different methods, each approaching the same phenomenon from a different perspective. As traits, we used, body sizes, gall type (position on plant, structure of gall) and phenology, among others, as well as phylogenetic proxies. When jointly applied, the methods demonstrate distinctly different imprints of traits within the two bipartite network elements (Salix–galler versus galler–parasitoid interactions). Of the galler–parasitoid sub-network's interactions, approximately half were explainable by the species traits used; of the Salix–galler sub-network's interactions, traits explained at most two-fifths. Gall type appeared to be the most important structuring trait in both networks. Phylogeny explained as much, or more than did our tested traits, suggesting that traits may be conserved and phylogeny therefore an effective proxy. Overall, the more specialized structure of the Salix–galler network versus the more nested structure of the galler–parasitoid network meant that different methods were more effective at capturing interactions and interaction structure in the different sub-networks. Thus, our analysis reveals how structuring impacts may vary even between levels within the same multitrophic network, and calls for comparative analyses of trait matching across a wide set of systems and methods.
Abstract
Ruminants, including sheep, contribute significantly to methane emissions, thus resulting in high emissions per kg of product. However, they can utilise plant material unsuitable for human consumption, thereby transforming it into valuable, protein-rich food. Grazing also preserves cultural landscapes and can contribute to carbon sequestration. Under¬standing the balance between these factors within the climate change context is crucial. This study inves-tigates the environmental impact of meat, milk, and wool production from sheep farming in Norway and Slovenia.
Abstract
Ruminants, including sheep, significantly contribute to methane emissions, which results in high emissions per kg of product. Conversely, ruminants can utilise plant material unsuitable for human consumption, effectively converting it into valuable, protein-rich food. Grazing also maintains cultural landscapes and contributes to carbon sequestration. Therefore, under- standing the balance between these factors in the context of climate change is essential. This study analyses the environmental impact of meat, milk, and wool production from sheep farming in Norway and Slovenia.
Abstract
Fish counting is crucial in fish farming. Density map-based fish counting methods hold promise for fish counting in high-density scenarios; however, they suffer from ineffective ground truth density map generation. High labeling complexities and disturbance to fish growth during data collection are also challenging to mitigate. To address these issues, LDNet, a versatile network with attention implemented is introduced in this study. An imbalanced Optimal Transport (OT)-based loss function was used to effectively supervise density map generation. Additionally, an Image Manipulation-Based Data Augmentation (IMBDA) strategy was applied to simulate training data from diverse scenarios in fixed viewpoints in order to build a model that is robust to different environmental changes. Leveraging a limited number of training samples, our approach achieved notable performances with an 8.27 MAE, 9.97 RMSE, and 99.01% Accuracy on our self-curated Fish Count-824 dataset. Impressively, our method also demonstrated superior counting performances on both vehicle count datasets CARPK and PURPK+, and Penaeus_1k Penaeus Larvae dataset when only 5%–10% of the training data was used. These outcomes compellingly showcased our proposed approach with a wide applicability potential across various cases. This innovative approach can potentially contribute to aquaculture management and ecological preservation through counting fish accurately.
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Authors
Jorunn BørveAbstract
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Authors
Jan Peter George Mari Rusanen Egbert Beuker Leena Yrjänä Volkmar Timmermann Nenad Potočić Sakari Välimäki Heino KonradAbstract
Ash dieback (ADB) has been threatening populations of European ash (Fraxinus excelsior & F. angustifolia) for more than three decades. Although much knowledge has been gathered in the recent past, practical conservation measures have been mostly implemented at local scale. Since range contraction in both ash species is likely to be exacerbated already in the near future by westward expansion of the emerald ash borer and climate change, systematic conservation frameworks need to be developed to avoid long-term population-genetic consequences and depletion of genomic diversity. In this article, we address the advantages and obstacles of conservation approaches aiming to conserve genetic diversity in situ or ex situ during tree pandemics. We are reviewing 47 studies which were published on ash dieback to unravel three important dimensions of ongoing conservation approaches or perceived conservation problems: i) conservation philosophy (i.e. natural selection, resistance breeding or genetic conservation), ii) the spatial scale (ecosystem, country, continent), and iii) the integration of genetic safety margins in conservation planning. Although nearly equal proportions of the reviewed studies mention breeding or active conservation as possible long-term solutions, only 17 % consider that additional threats exist which may further reduce genetic diversity in both ash species. We also identify and discuss several knowledge gaps and limitations which may have limited the initiation of conservation projects at national and international level so far. Finally, we demonstrate that there is not much time left for filling these gaps, because European-wide forest health monitoring data indicates a significant decline of ash populations in the last 5 years.
Authors
Johannes RahlfAbstract
No abstract has been registered