Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2020
Abstract
Controlled crosses were made on clones in a seed orchard and the pollination bags were kept on the branches until the cones were harvested. Cones after open pollination were collected at the same time. Seedlings from the controlled pollinations, from open pollination of the same maternal parent and from commercial provenances were grown in growth chambers and terminal bud set was recorded after short day treatments. The seedlings from the seeds of cones that were kept in the pollination bags had a significantly later bud set then expected based on comparisons with their half-sibs from open pollination. The difference corresponds to a decrease in altitude of 100 m at provenance level. It can be caused by epigenetic effects due to temperature differences inside and outside the bags during seed maturation.
Abstract
Key message This study showed that regeneration success (presence of oaks ≥ 150 cm in total height) in artificial canopy openings of a mature mixed sessile oak stand was mainly driven by initial oak seedling density. Context Small-scale harvesting methods as practiced in close-to-nature forestry may disadvantage the regeneration of more light-demanding tree species including sessile oak (Quercus petraea [Mattuschka] Liebl.) and thus cause regeneration failure. However, owing to the short-term nature of many previous studies, regeneration success of sessile oak could not be properly ascertained. Aims This study examined oak seedling development over a time period of ten growing seasons in canopy openings of 0.05 to 0.2 ha in size created through group selection harvesting in a mature mixed sessile oak forest in southwestern Germany. We tried to answer the following research questions: (i) how do initial stand conditions relate to and interact with oak seedling density and seedling height growth, and (ii) what are the driving factors of regeneration success under the encountered site conditions. Methods We evaluated the influence of solar radiation, Rubus spp. cover, initial oak seedling density, and competition from other tree species on change in density and height of oak seedlings, as well as overall regeneration success (oak seedlings ≥ 150 cm in height). Results Regeneration success increased with initial oak seedling density and solar radiation levels and decreased with early Rubus spp. cover. Density and maximum height of oak seedlings was negatively related with competition of other woody species. Conclusion Results of our longer-term study demonstrate that forest management activities to regenerate sessile oak naturally are only successful in stands (i) without advance regeneration of other woody species and without established, recalcitrant ground vegetation, (ii) with a sufficiently high initial oak seedling density in larger patches following mast years, and (iii) where periodic monitoring and control of competing woody individuals can be ensured. Our findings further corroborate the view that natural regeneration of sessile oak in small-scale canopy openings is possible in principle.
Authors
Inger Sundheim FløistadAbstract
No abstract has been registered
Authors
Sherin Jose Joel Abbey Laura Jaakola David PercivalAbstract
Monilinia blight disease caused by Monilinia vaccinii-corymbosi (Reade) Honey (M.vc) causes severe damage and economic losses in wild blueberry growing regions. Molecular mechanisms regulating defence responses of wild blueberry phenotypes towards this causal fungus are not yet fully known. A reliable quantification of gene expression using quantitative real time PCR (qPCR) is fundamental for measuring changes in target gene expression. A crucial aspect of accurate normalisation is the choice of appropriate reference genes. This study evaluated the expression stability of seven candidate reference genes (GAPDH, UBC9, UBC28, TIP41, CaCSa, PPR and RH8) in floral tissues of diploid and tetraploid wild blueberry phenotypes challenged with M.vc. The expression stability was calculated using five algorithms: geNorm, NormFinder, BestKeeper, deltaCt and RefFinder. The results indicated that UBC9 and GAPDH were the most stable reference genes, while RH8 and PPR were the least stable ones. To further validate the suitability of the analyzed reference genes, the expression level of a pathogenesis related protein gene (i.e., PR3) was analysed for both phenotypes at four time points of infection. Our results may be beneficial for future studies involving the quantification of relative gene expression levels in wild blueberry species.
Authors
Rowena C. Downie Min Lin Beatrice Corsi Andrea Ficke Morten Lillemo Richard P. Oliver Huyen T. T. Phan Kar-Chun Tan James CockramAbstract
The fungus Parastagonospora nodorum is a narrow host range necrotrophic fungal pathogen that causes Septoria nodorum blotch (SNB) of cereals, most notably wheat. Although commonly observed on wheat seedlings, P. nodorum infection has the greatest effect on the adult crop. It results in leaf blotch, which limits photosynthesis and thus crop growth and yield. It can also affect the wheat ear, resulting in glume blotch which directly affects grain quality. Reports of P. nodorum fungicide resistance, the increasing use of reduced tillage agronomic practices and high evolutionary potential of the pathogen, combined with changes in climate and agricultural environments, mean that genetic resistance to SNB remains a high priority in many regions of wheat cultivation. In this review, we summarise current information on P. nodorum population structure and its implication for improved SNB management. We then review recent advances in the genetics of host resistance to P. nodorum and the necrotrophic effectors it secretes during infection, integrating the genomic positions of these genetic loci using the recently released wheat reference genome assembly. Finally, we discuss the genetic and genomic tools now available for SNB resistance breeding and consider future opportunities and challenges in crop health management using the wheat-P. nodorum interaction as a model.
Authors
Simon Jakobsson Joachim Paul Töpper Marianne Evju Erik Framstad Anders Lyngstad Bård Pedersen Hanne Sickel Anne Sverdrup-Thygeson Vigdis Vandvik Liv Guri Velle Per Arild Aarrestad Signe NybøAbstract
Effective evidence-based nature conservation and habitat management relies on developing and refining our methodological toolbox for detecting critical ecological changes at an early stage. This requires not only optimizing the use and integration of evidence from available data, but also optimizing methods for dealing with imperfect knowledge and data deficiencies. For policy and management relevance, ecological data are often synthesized into indicators, which are assessed against reference levels and limit values. Here we explore challenges and opportunities in defining ecological condition in relation to a reference condition reflecting intact ecosystems, as well as setting limit values for good ecological condition, linked to critical ecological thresholds in dose–response relationships between pressures and condition variables. These two concepts have been widely studied and implemented in aquatic sciences, but rarely in terrestrial systems. In this paper, we address practical considerations, theoretical challenges and possible solutions using different approaches to determine reference and limit values for good ecological condition in terrestrial ecosystems, based on empirical experiences from a case study in central Norway. We present five approaches for setting indicator reference values for intact ecosystems: absolute biophysical boundaries, reference areas, reference communities, ecosystem dynamics based models, and habitat availability based models. We further present four approaches for identifying indicator limit values for good ecological condition: empirically estimated values, statistical distributions, assumed linear relationships, and expert judgement-based limits. This exercise highlights the versatile and robust nature of ecological condition assessments based on reference and limit values for different management purposes, for situations where knowledge of the underlying relationships is lacking, and for situations limited by data availability. Ecological condition Index Management Reference condition Terrestrial
Authors
Robert Jankowiak Halvor Solheim Piotr Bilański Seonju Marincowitz Michael J. WingfieldAbstract
During surveys of insect-associated mycobiomes in Norway, Poland, and Russia, isolates with affinity to Graphilbum (Ophiostomatales, Ascomycota) were recovered. In this study, eight known Graphilbum species as well as the newly collected isolates were compared based on morphology and DNA sequence data for four gene regions. The results revealed seven new species, described here as G. acuminatum, G. carpaticum, G. curvidentis, G. furuicola, G. gorcense, G. interstitiale, and G. sexdentatum. In addition to these species, G. crescericum and G. sparsum were commonly found in Norway. All new species were recovered from conifers in association with bark beetles, cerambycid beetles, and weevils and were morphologically similar, predominantly with pesotum-like asexual morphs. Where sexual morphs were present, these were small ascomata with short necks and rodshaped ascospores having hyaline sheaths. The results suggest that Graphilbum species are common members of the Ophiostomatales in conifer ecosystems.
Authors
Hermine Mitter Anja-K. Techen Franz Sinabell Katharina Helming Erwin Schmid Benjamin Leon Bodirsky Ian Holman Kasper Kok Heikki Lehtonen Adrian Leip Chantal Le Mouel Erik Mathijs Bano Mehdi Klaus Mittenzwei Olivier Mora Knut Øistad Lillian Øygarden Jörg A. Priess Pytrik Reidsma Rüdiger Schaldach Martin SchönhartAbstract
Scenarios describe plausible and internally consistent views of the future. They can be used by scientists, policymakers and entrepreneurs to explore the challenges of global environmental change given an appropriate level of spatial and sectoral detail and systematic development. We followed a nine-step protocol to extend and enrich a set of global scenarios – the Shared Socio-economic Pathways (SSPs) – providing regional and sectoral detail for European agriculture and food systems using a one-to-one nesting participatory approach. The resulting five Eur-Agri-SSPs are titled (1) Agriculture on sustainable paths, (2) Agriculture on established paths, (3) Agriculture on separated paths, (4) Agriculture on unequal paths, and (5) Agriculture on high-tech paths. They describe alternative plausible qualitative evolutions of multiple drivers of particular importance and high uncertainty for European agriculture and food systems. The added value of the protocol-based storyline development process lies in the conceptual and methodological transparency and rigor; the stakeholder driven selection of the storyline elements; and consistency checks within and between the storylines. Compared to the global SSPs, the five Eur-Agri-SSPs provide rich thematic and regional details and are thus a solid basis for integrated assessments of agriculture and food systems and their response to future socio-economic and environmental changes.
Authors
Bo Liu Keith Davies Avice HallAbstract
Silicon is found in all plants and the accumulation of silicon can improve plant tolerance to biotic stress. Strawberry powdery mildew (Podosphaera aphanis) and two-spotted spider mite (Tetranychus urticae) are both detrimental to strawberry production worldwide. Two field trials were done on a UK commercial strawberry farm in 2014 and 2015, to assess the effects of silicon nutrient applied via the fertigation system on P. aphanis and T. urticae. The silicon treatments decreased the severity of both P. aphanis and T. urticae in two consecutive years on different cultivars. The percentage leaf area infected with P. aphanis mycelium from silicon treated plants were 2.19 (in 2014) and 0.41 (in 2015) compared with 3.08 (in 2014) and 0.57 (in 2015) from the untreated plants. The etiology of the pathogen as measured by the Area Under the Disease Progress Curve from silicon (with and without fungicides) treatments was 152.7 compared with 217.5 from non-silicon (with and without fungicides) treatments for the overall period of 2014–2015. The average numbers of T. urticae recorded on strawberry leaves were 1.43 (in 2014) and 1.83 (in 2015) in plants treated with silicon compared with 8.82 (in 2014) and 6.69 (in 2015) in untreated plants. The silicon contents of the leaves from the silicon alone treatment were 26.8 μg mg-1 (in 2014) and 22.2 μg mg-1 (in 2015) compared with 19.7 μg mg-1 (in 2014) and 21.4 μg mg-1 (in 2015) from the untreated. The silicon nutrient root application contributed to improved plant resilience against P. aphanis and T. urticae. Silicon could play an important role in broad spectrum control of pests and diseases in commercial strawberry production.
Authors
Lars Sandved DalenAbstract
No abstract has been registered