Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2009
Authors
Geir Mathiesen Anita Sveen May Bente Brurberg Lasse Fredriksen Lars Axelsson Vincent EijsinkAbstract
Conclusion: This is the first comprehensive experimental study showing that predicted SPs in the L. plantarum genome actually are capable of driving protein secretion. The results reveal considerable variation between the SPs that is at least in part dependent on the protein that is secreted. Several SPs stand out as promising candidates for efficient secretion of heterologous proteins in L. plantarum. The results for NucA provide some hints as to the sequence-based prediction of SP functionality, but the general conclusion is that such prediction is difficult. The vector library generated in this study is based on exchangeable cassettes and provides a powerful tool for rapid experimental screening of SPs.
Authors
Geir Mathiesen Anita Sveen May Bente Brurberg Lasse Fredriksen Lars Axelsson Vincent EijsinkAbstract
No abstract has been registered
Authors
Ole Martin Eklo Randi Bolli Jens Kværner Tore Sveistrup Frauke Hofmeister Eivind Solbakken Nicolas Jarvis Fredrik Stenemo Eirik Romstad Borghild Glorvigen Tor Anton GurenAbstract
No abstract has been registered
Abstract
No abstract has been registered
Abstract
Minirhizotrons, transparent acrylic tubes inserted in the soil, are well suited for long term, non destructive, in situ observations of fine roots. In minirhizotrons, the fine roots are regularly photographed and the root images are visually evaluated according to their status as living, dead or disappeared. This evaluation gives the background for further statistical treatment to estimate the fine root longevity. It is inherent in the minirhizotron technique that a large group of roots will be described as “disappeared” due to grazing, overgrowing by other roots, unclear images or other reasons. Because the fraction of disappeared roots is substantial in some cases, this has consequences for the interpretation of the longevity results. We processed three years of minirhizotron images from Norway spruce stands in southeast Norway (30 yr old) and northern Finland (60 yr old). Of all processed fine roots 32 and 23% was evaluated as disappeared in Norway and Finland, respectively. When roots labelled as disappeared were pooled together with dead ones, the fine root longevity estimates, using the Kaplan Meier method, decreased almost by a factor of two (401 and 433 days), as opposed to labeling them as censored observations (770 and 750 days for Norway and Finland, respectively). Here we demonstrate how the early decision making on the fine root status bears consequences on the resulting longevity estimates. The implications will be discussed
Abstract
No abstract has been registered
Abstract
Two mature clones of Norway spruce (Picea abies (L.) Karst.) shown to have different level of resistance towards inoculation of Heterobasidion parviporum were compared with respect to spatiotemporal expression of transcripts related to biosynthesis of lignin, stilbenes and other phenolic compounds in response to fungal inoculation and physical wounding. Both clones responded to H. parviporum and physical wounding at transcriptional and chemical levels. Taxifolin, detected in the resistant clone only, increased in concentration following both wounding and inoculation. Concentrations of stilbenoid glucosides were highest in the susceptible clone. Following wounding or inoculation, concentrations of these glucosides increased in the susceptible clone, and quantities of their corresponding aglycones increased dramatically in both clones close to the treatment point. Significant changes in transcription were detected over the entire lesion length for all transcripts, and only the changes in a few transcripts indicated a response to inoculation with H. parviporum differing from that caused by wounding alone. The resistant clone had higher basal concentrations of lignin (LTGA) compared to the susceptible clone; concentrations increased in both clones after wounding and wounding plus inoculation treatments, but remained consistently higher in the resistant clone, suggesting higher lignin levels in the cell walls compared to the susceptible clone. In addition, the transcript level in the same clones was also measured the following year and we saw indications of primed defences for a number of gene products likely resulting from the inoculations performed 12 months prior.
Authors
Holger Lange Nicholas Clarke O. Janne Kjønaas Wenche Aas Kjell Andreassen Isabella Børja Harald Bratli Susanne Eich-Greatorex Toril Drabløs Eldhuset Kjersti Holt Hansen Tonje Økland Ingvald Røsberg Trine Aulstad Sogn Volkmar TimmermannAbstract
No abstract has been registered
Authors
Nicholas Clarke O. Janne Kjønaas Wenche Aas Kjell Andreassen Isabella Børja Harald Bratli Susanne Eich-Greatorex Toril Drabløs Eldhuset Kjersti Holt Hanssen Holger Lange Tonje Økland Ingvald Røsberg Trine Aulstad Sogn Volkmar TimmermannAbstract
In Norway, it is planned to double the stationary use of bioenergy from all sources by up to 14 TWh before 2020, with much of this increase coming from forest resources, including residues like branches and tops (which are not much used today) being removed after tree harvest. This removal will reduce the supply of nutrients and organic matter to the forest soil, and may in the longer term increase the risk for future nutrient imbalance, reduced forest production, and changes in biodiversity and ground vegetation species composition. However, field experiments have found contrasting results (e.g. Johnson and Curtis 2001; Olsson et al. 1996). Soil effects of increased biomass removal will be closely related to soil organic matter (SOM) dynamics, litter quality, and turnover rates. The SOM pool is derived from a balance between above- and below-ground input of plant material and decomposition of both plants and SOM. Harvest intensity may affect the decomposition of existing SOM as well as the build-up of new SOM from litter and forest residues, by changing factors like soil temperature and moisture as well as amount and type of litter input. Changes in input of litter with different nutrient concentrations and decomposition patterns along with changes in SOM decomposition will affect the total storage of carbon, nitrogen and other vital nutrients in the soil. To quantify how different harvesting regimes lead to different C addition to soil, and to determine which factors have the greatest effect on decomposition of SOM under different environmental conditions, two Norway spruce forest systems will be investigated in the context of a research project starting in 2008/2009, one in eastern and one in western Norway, representing different climatic and landscape types. At each location, two treatment regimes will be tested: Conventional harvesting, with residues left on-site (CH) Aboveground whole-tree harvest, with branches, needles, and tops removed (WTH). Input of different forest residues will be quantified post harvest. Soil water at 30 cm soil depth will be analysed for nutrients and element fluxes will be estimated to provide information about nutrient leaching. Soil respiration will be measured, along with lab decomposition studies under different temperature and moisture regimes. Long term in situ decomposition studies will be carried out in the WTH plots using three different tree compartments (needles, coarse twigs, fine roots) decomposing in litter bags, in order to determine their limit value. The structure of the fungal community will be determined by soil core sampling and use of molecular techniques allowing qualitative and quantitative estimation. Understorey vegetation will be sampled to determine the biomass, and the frequency of all vascular plants, bryophytes and lichens will be estimated. After harvesting, replanting will be carried out. Seedling survival, causes of mortality and potential damage, growth, and needle nutrients will be monitored. Results from these studies will be used to identify key processes explaining trends observed in two series of ongoing long-term whole-tree thinning trials. We shall combine knowledge obtained using field experiments with results of modelling and data from the Norwegian Monitoring Programme for Forest Damage and National Forest Inventory. This will help us to predict and map the ecologically most suitable areas for increased harvesting of branches and tops on a regional scale based on current knowledge, and to identify uncertainties and additional knowledge needed to improve current predictions.
Authors
Holger Lange Nicholas Clarke O. Janne Kjønaas Wenche Aas Kjell Andreassen Isabella Børja Harald Bratli Susanne Eich-Greatorex Toril Drabløs Eldhuset Kjersti Holt Hanssen Tonje Økland Ingvald Røsberg Trine Aulstad Sogn Tomasgaard Volkmar TimmermannAbstract
No abstract has been registered