Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2023
Abstract
No abstract has been registered
Authors
Junbin Zhao Mikhail Mastepanov Cornelya Klutsch Tobias Daugaard-Petersen Hanna Marika SilvennoinenAbstract
No abstract has been registered
Authors
Clemens Blattert Mikko Mönkkönen Daniel Burgas Fulvio Di Fulvio Astor Toraño Caicoya Marta Vergarechea Julian Klein Markus Hartikainen Clara Antón Fernández Rasmus Astrup Michael Emmerich Nicklas Forsell Jani Lukkarinen Johanna Lundström Samuli Pitzén Werner Poschenrieder Eeva Primmer Tord Snäll Kyle EyvindsonAbstract
The European Union (EU) set clear climate change mitigation targets to reach climate neutrality, accounting for forests and their woody biomass resources. We investigated the consequences of increased harvest demands resulting from EU climate targets. We analysed the impacts on national policy objectives for forest ecosystem services and biodiversity through empirical forest simulation and multi-objective optimization methods. We show that key European timber-producing countries – Finland, Sweden, Germany (Bavaria) – cannot fulfil the increased harvest demands linked to the ambitious 1.5°C target. Potentials for harvest increase only exists in the studied region Norway. However, focusing on EU climate targets conflicts with several national policies and causes adverse effects on multiple ecosystem services and biodiversity. We argue that the role of forests and their timber resources in achieving climate targets and societal decarbonization should not be overstated. Our study provides insight for other European countries challenged by conflicting policies and supports policymakers.
Authors
Iva Franić Eric Allan Simone Prospero Kalev Adamson Fabio Attorre Marie-Anne Auger-Rozenberg Sylvie Augustin Dimitrios Avtzis Wim Baert Marek Barta Kenneth Bauters Amani Bellahirech Piotr Boroń Helena Bragança Tereza Brestovanská May Bente Brurberg Treena Burgess Daiva Burokienė Michelle Cleary Juan Corley David R. Coyle György Csóka Karel Černý Kateryna Davydenko Maarten de Groot Julio Javier Diez H. Tuğba Doğmuş Lehtijärvi Rein Drenkhan Jacqueline Edwards Mohammed Elsafy Csaba Béla Eötvös Roman Falko Jianting Fan Nina Feddern Ágnes Fürjes-Mikó Martin M. Gossner Bartłomiej Grad Martin Hartmann Ludmila Havrdova Miriam Kádasi Horáková Marketa Hrabětová Mathias Just Justesen Magdalena Kacprzyk Marc Kenis Natalia Kirichenko Marta Kovač Volodymyr Kramarets Nikola Lacković Maria Victoria Lantschner Jelena Lazarević Marianna Leskiv Hongmei Li Corrie Lynne Madsen Chris Malumphy Dinka Matošević Iryna Matsiakh Tom W. May Johan Meffert Duccio Migliorini Christo Nikolov Richard O’Hanlon Funda Oskay Trudy Paap Taras Parpan Barbara Piškur Hans Peter Ravn John Richard Anne Ronse Alain Roques Beat Ruffner Alberto Santini Karolis Sivickis Carolina Soliani Venche Talgø Maria Tomoshevich Anne Uimari Michael Ulyshen Anna Maria Vettraino Caterina Villari Yongjun Wang Johanna Witzell Milica Zlatković René EschenAbstract
Non-native pests, climate change, and their interactions are likely to alter relationships between trees and tree-associated organisms with consequences for forest health. To understand and predict such changes, factors structuring tree-associated communities need to be determined. Here, we analysed the data consisting of records of insects and fungi collected from dormant twigs from 155 tree species at 51 botanical gardens or arboreta in 32 countries. Generalized dissimilarity models revealed similar relative importance of studied climatic, host-related and geographic factors on differences in tree-associated communities. Mean annual temperature, phylogenetic distance between hosts and geographic distance between locations were the major drivers of dissimilarities. The increasing importance of high temperatures on differences in studied communities indicate that climate change could affect tree-associated organisms directly and indirectly through host range shifts. Insect and fungal communities were more similar between closely related vs. distant hosts suggesting that host range shifts may facilitate the emergence of new pests. Moreover, dissimilarities among tree-associated communities increased with geographic distance indicating that human-mediated transport may serve as a pathway of the introductions of new pests. The results of this study highlight the need to limit the establishment of tree pests and increase the resilience of forest ecosystems to changes in climate.
Authors
Thilaga Sethuraman Shanmugam Munisamy Ganesan Meenakshisundaram Anicia Q. Hurtado Ganesh DossAbstract
Regeneration of polyploidy from young thallus segments of Kappaphycus alvarezii was optimized for genetic improvement. Kappaphycus thallus segment cultured on sterile sea water supplemented with various combinations of Indole acetic acid, Kinetin and Acardian Marine Plant Extract Powder revealed differential response on callus proliferation and development of new thallus. Presence of Acardian Marine Plant Extract Powder (3 mg/l) in combination with Indole acetic acid and Kinetin (0.01 mg/l each) had induced the longest emerging thallus. Exposure of thallus to colchicine at 0.01% with above combination was optimal to induce high frequency regeneration of polyploidy mostly from the meristematic cells. Anatomical study of colchicine induced polyploidy revealed larger cortical cells with irregular thickening of epidermal layer. Phase contrast and Scanning Electron Microscopic study revealed increase in cell size in cortical region with significantly larger number of spherical shaped carrageenan globules in colchicine induced polyploidy than normal thallus. Single cells isolated using enzymatic treatments from colchicine induced polyploidy, shown chromosome number with a ploidy status of 4n ≈ 40. Whereas in normal thallus, only half the number of chromosomes (2n ≈ 20) were observed. Polyploidy were successfully acclimatized gradually using raft method for further evaluation. This is the first report reveals the induction and regeneration of polyploidy in Kappaphycus. The possible application of this finding in genetic improvement of Kappaphycus is discussed.
Abstract
Environmental assessments are required prior to remediation and redevelopment of contaminated sites. To date, regulatory guidelines are commonly based on total concentrations. Occasionally, simple leaching procedures are included in environmental assessment. Despite being essential for quantification of contaminant transport, analysis of hydraulic conductivity is rarely considered. Cost-effective methods that reflect both contaminant leaching and hydrogeological properties of contaminated soils are needed to ensure proper soil management. The aim of this study was to simultaneously evaluate contaminant leaching and hydraulic conductivity in soil using a combined column test (CCT) and compare this to the leaching results from batch tests (BT) and transport estimates derived from the empirical Hazen equation. Two soils of different origin were characterized using the CCT. By including physical and chemical factors affecting the release and retention of contaminants, the CCT provides an integrated assessment of leaching and transport of trace elements from soils. Additionally, the effect of soil compaction was investigated as a physical treatment to reduce leaching and transport in contaminated soils. Soil compaction did not demonstrate reduced leaching, but a less extensive contaminant transport was observed due to reduced hydraulic conductivity in the soil.
Authors
Richard Helliwell Tommy Ruud Davide Bochicchio Anne Grete Kongsted Matthias Koesling Stig Milan Thamsborg Marina Spinu Marina Stukelj Atle WibeAbstract
No abstract has been registered
Abstract
Crown rot, caused by Phytophthora cactorum, is a devastating disease of strawberry. While most commercial octoploid strawberry cultivars (Fragaria × ananassa Duch) are generally susceptible, the diploid species Fragaria vesca is a potential source of resistance genes to P. cactorum. We previously reported several F. vesca genotypes with varying degrees of resistance to P. cactorum. To gain insights into the strawberry defence mechanisms, comparative transcriptome profiles of two resistant genotypes (NCGR1603 and Bukammen) and a susceptible genotype (NCGR1218) of F. vesca were analysed by RNA-Seq after wounding and subsequent inoculation with P. cactorum. Differential gene expression analysis identified several defence-related genes that are highly expressed in the resistant genotypes relative to the susceptible genotype in response to P. cactorum after wounding. These included putative disease resistance (R) genes encoding receptor-like proteins, receptor-like kinases, nucleotide-binding sites, leucine-rich repeat proteins, RPW8-type disease resistance proteins, and ‘pathogenesis-related protein 1’. Seven of these R-genes were expressed only in the resistant genotypes and not in the susceptible genotype, and these appeared to be present only in the genomes of the resistant genotypes, as confirmed by PCR analysis. We previously reported a single major gene locus RPc-1 (Resistance to Phytophthora cactorum 1) in F. vesca that contributed resistance to P. cactorum. Here, we report that 4–5% of the genes (35–38 of ca 800 genes) in the RPc-1 locus are differentially expressed in the resistant genotypes compared to the susceptible genotype after inoculation with P. cactorum. In particular, we identified three defence-related genes encoding wall-associated receptor-like kinase 3, receptor-like protein 12, and non-specific lipid-transfer protein 1-like that were highly expressed in the resistant genotypes compared to the susceptible one. The present study reports several novel candidate disease resistance genes that warrant further investigation for their role in plant defence against P. cactorum.
Authors
Eva Skarbøvik Sofie Gyritia Madsen van't Veen Emma E. Lannergård Hannah Tabea Wenng Marc Stutter Magdalena Bieroza Kevin Atcheson Philip Jordan Jens Fölster Per-Erik Mellander Brian Kronvang Hannu Marttila Øyvind Kaste Ahti Lepistö Maria KämäriAbstract
Climate change in combination with land use alterations may lead to significant changes in soil erosion and sediment fluxes in streams. Optical turbidity sensors can monitor with high frequency and can be used as a proxy for suspended sediment concentration (SSC) provided there is an acceptable calibration curve for turbidity measured by sensors and SSC from water samples. This study used such calibration data from 31 streams in 11 different research projects or monitoring programmes in six Northern European countries. The aim was to find patterns in the turbidity-SSC correlations based on stream characteristics such as mean and maximum turbidity and SSC, catchment area, land use, hydrology, soil type, topography, and the number and representativeness of the data that are used for the calibration. There were large variations, but the best correlations between turbidity and SSC were found in streams with a mean and maximum SSC of >30–200 mg/l, and a mean and maximum turbidity above 60–200 NTU/FNU, respectively. Streams draining agricultural areas with fine-grained soils had better correlations than forested streams draining more coarse-grained soils. However, the study also revealed considerable differences in methodological approaches, including analytical methods to determine SSC, water sampling strategies, quality control procedures, and the use of sensors based on different measuring principles. Relatively few national monitoring programmes in the six countries involved in the study included optical turbidity sensors, which may partly explain this lack of methodological harmonisation. Given the risk of future changes in soil erosion and sediment fluxes, increased harmonisation is highly recommended, so that turbidity data from optical sensors can be better evaluated and intercalibrated across streams in comparable geographical regions.
Abstract
Quantifying the similarities and differences in atmospheric nitrogen (N) deposition between different ecosystems is important to develop effective measures to reduce air pollution and maintain biodiversity. Here we show that the constitution of N deposition differed significantly between a grassland and a desert ecosystem in Northwestern China. Flux of bulk (wet plus part of dry deposition) and dry (gaseous NH3 and NO2) deposition were continuously monitored from 2018 to 2020. The grassland and desert sites had similar amount of total N deposition, being 7.29 and 6.33 kg N ha−1 yr−1, respectively. However, N deposition at the grassland was dominated by the bulk deposition (4.44 kg N ha−1 yr−1, 61% of the total N deposition), whereas that at the desert was dominated by dry deposition (4.20 kg N ha−1 yr−1, 66% of total deposition). The desert had greater ambient concentrations of NH3 (3.66 μg N m−3) and NO2 (1.52 μg N m−3) than the grassland (2.73 μg NH3–N m−3 and 0.72 μg NO2–N m−3). The amount of reduced N deposition (NH4+ and NH3) was around 3 times of that of oxidized N deposition (NO3− and NO2) in both ecosystems. The N deposition rates in both ecosystems have exceeded the critical load for the fragile ecosystems (5–10 kg N ha−1 yr−1), highlighting the importance of reducing N emission sources that are related with anthropogenic disturbance.