Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2016
Abstract
Process-based models (PBM) for simulation of weather dependent grass growth can assist farmers andplant breeders in addressing the challenges of climate change by simulating alternative roads of adap-tation. They can also provide management decision support under current conditions. A drawback ofexisting grass models is that they do not take into account the effect of winter stresses, limiting theiruse for full-year simulations in areas where winter survival is a key factor for yield security. Here, wepresent a novel full-year PBM for grassland named BASGRA. It was developed by combining the LIN-GRA grassland model (Van Oijen et al., 2005a) with models for cold hardening and soil physical winterprocesses. We present the model and show how it was parameterized for timothy (Phleum pratense L.),the most important forage grass in Scandinavia and parts of North America and Asia. Uniquely, BASGRAsimulates the processes taking place in the sward during the transition from summer to winter, includ-ing growth cessation and gradual cold hardening, and functions for simulating plant injury due to lowtemperatures, snow and ice affecting regrowth in spring. For the calibration, we used detailed data fromfive different locations in Norway, covering a wide range of agroclimatic regions, day lengths (latitudesfrom 59◦to 70◦N) and soil conditions. The total dataset included 11 variables, notably above-ground drymatter, leaf area index, tiller density, content of C reserves, and frost tolerance. All data were used inthe calibration. When BASGRA was run with the maximum a-posteriori (MAP) parameter vector fromthe single, Bayesian calibration, nearly all measured variables were simulated to an overall normalizedroot mean squared error (NRMSE) < 0.5. For many site × experiment combinations, NRMSE was <0.3. Thetemporal dynamics were captured well for most variables, as evaluated by comparing simulated timecourses versus data for the individual sites. The results may suggest that BASGRA is a reasonably robustmodel, allowing for simulation of growth and several important underlying processes with acceptableaccuracy for a range of agroclimatic conditions. However, the robustness of the model needs to be testedfurther using independent data from a wide range of growing conditions. Finally we show an exampleof application of the model, comparing overwintering risks in two climatically different sites, and dis-cuss future model applications. Further development work should include improved simulation of thedynamics of C reserves, and validation of winter tiller dynamics against independent data.
Authors
Johanna Gottschamel Andreas G. Lössl Stephanie Ruf Yanliang Wang Morten Skaugen Ralph Bock Jihong Liu ClarkeAbstract
Abstract Dengue fever is a disease in many parts of the tropics and subtropics and about half the world’s popula- tion is at risk of infection according to the World Health Organization. Dengue is caused by any of the four related dengue virus serotypes DEN-1, -2, -3 and -4, which are transmitted to people by Aedes aegypti mosquitoes. Cur- rently there is only one vaccine (DengvaxiaÒ) available (limited to a few countries) on the market since 2015 after half a century’s intensive efforts. Affordable and accessible vaccines against dengue are hence still urgently needed. The dengue envelop protein domain III (EDIII), which is capable of eliciting serotype-specific neutralizing antibod- ies, has become the focus for subunit vaccine development. To contribute to the development of an accessible and affordable dengue vaccine, in the current study we have used plant-based vaccine production systems to generate a dengue subunit vaccine candidate in tobacco. Chloroplast genome engineering was applied to express serotype- specific recombinant EDIII proteins in tobacco chloroplasts using both constitutive and ethanol-inducible expression systems. Expression of a tetravalent antigen fusion con- struct combining EDIII polypeptides from all four ser- otypes was also attempted. Transplastomic EDIII- expressing tobacco lines were obtained and homoplasmy was verified by Southern blot analysis. Northern blot analyses showed expression of EDIII antigen-encoding genes. EDIII protein accumulation levels varied for the different recombinant EDIII proteins and the different expression systems, and reached between 0.8 and 1.6 % of total cellular protein. Our study demonstrates the suitability of the chloroplast compartment as a production site for an EDIII-based vaccine candidate against dengue fever and presents a GatewayÒ plastid transformation vector for inducible transgene expression.
Authors
Habtamu AlemAbstract
No abstract has been registered
Abstract
Effects of wilting rate and fermentation stimulators and inhibitors on protein characteristics of forages typ- ical for organic production were assessed using tradi- tional analytical methods and a gas production in vitro assay. The hypotheses were that the proportion of the crude protein (CP) fraction that was soluble would be lowest, and the protein feed value highest, under rapid wilting and restricted fermentation. The solubil- ity of the CP fraction varied according to treatments and between a first and a second cut, with moderate and high content of clover respectively. It was, how- ever, of minor importance for the protein value, both calculated as amino acids absorbed in the small intes- tine (AAT 20 ) and estimated as effective utilizable crude protein (uCP 04 ) by the in vitro assay. In ensiled her- bage, AAT 20 was highest in rapidly wilted and restrict- edly fermented silages made from a first cut dominated by highly digestible grasses. Silages from the second cut dominated by red clover were far lower in AAT 20 . The in vitro assay did not separate silages according to herbage composition or wilting rate, but ranked restrictedly fermented above extensively fer- mented with regard to protein supply. The assay might still have caught the characteristics that determine the true protein value in vivo.
Authors
Antonio Carlos Ferraz Filho Blas Mola-Yudego José Ramón González-Olabarria José Roberto Soares ScolforoAbstract
The objective of this paper is to determine the pruning level that does not affect tree growth, increasing the amount of clear wood production in a single lift at age 1.3 years. The experiment was developed in the municipality of Aracruz, Espírito Santo state, Brazil. The pruning intensities considered were: 40%, 55%, 70% and 85% of the total tree height, as well as no pruning for control. The results obtained three years after pruning showed that it is possible to reach up to a 70% of total tree height pruned (mean pruned height of 7.3 m) in a single pruning lift without affecting the size of the 700 largest trees per hectare in diameter. High intensity pruning (85%) translated into negative effects on tree growth. Low intensity pruning (40%) also had moderate effects on growth, possibly due to exposure of negative effects of leaf area removal without benefiting from the positive effects on canopy characteristics. Finally, the paper discusses different thinning regimes and its implications on the pruning regime. The results of this research can contribute to improve the management of fast growing plantations for timber production.
Authors
Marcin Stróz ̇ecki Mateusz Samson Bogdan Chojnicki Jacek Leśny Christophe Moni Marek Urbaniak Janusz Olejnik Radoslaw Juszczak Hanna Marika SilvennoinenAbstract
No abstract has been registered
Authors
Aytac Erdemir Olvar BerglandAbstract
No abstract has been registered
Abstract
No abstract has been registered
Abstract
In a landscape of fragmented private ownership, the need to coordinate game management across large areas presents challenges for landowners and public agencies alike. This paper describes how a recent reorganization of moose management in Norway achieves landscape-level planning while maintaining a tradition of local management by hunting teams. These two seemingly contradictory imperatives – coordinating wildlife management across large areas while keeping benefits and control in the hands of local resource users – are resolved through a nesting of management institutions, wherein the state serves a regulatory function and mid-level government (the county) serves to facilitate inter-local cooperation. This paper documents how the system is structured and describes the balance of incentives that enable the system to work. Information was gathered via interviews with staff at the Norwegian Directorate for Nature Management (now called the Norwegian Environment Agency), with wildlife management officials at the municipal level, with hunters, and from the most recent regulatory documents.
Abstract
Measuring energy and matter fluxes between the atmosphere and vegetation using the Eddy Covariance (EC) technique is the state-of-the-art method to quantify carbon exchange between terrestrial ecosystems and their surrounding. The EC equipment is usually mounted onto a flux tower reaching higher than the local canopy. Today, more than 600 flux towers are in operation worldwide. The methodological requirements lead to high sampling frequency (20 Hz) and thus to the production of very long time series. These are related to temperature, wind components, water vapour, heat and gas exchange, and others. In this chapter, the potential of Recurrence Analysis (RA) to investigate the dynamics of this atmosphere-vegetation boundary system is elucidated. In particular, the effect of temporal resolution, the identification of periods particular suitable for reliable EC flux calculations, and the detection of transitions between dynamical regimes will be highlighted.