Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2023
Authors
Monica Sanden Eirill Ager-Wick Johanna Eva Bodin Nur Duale Anne-Marthe Ganes Jevnaker Kristian Prydz Volha Shapaval Ville Erling Sipinen Tage ThorstensenAbstract
No abstract has been registered
Authors
Haruna Sekabira Ghislain Tchoromi Tepa-Yotto Arnaud R. M. Ahouandjinou Karl Thunes Barry Pittendrigh Yusuf Kaweesa Manuele TamòAbstract
The COVID-19 pandemic, surprised many through its impact on the food systems, resulting in collapses in the food production value chains and in the integrated pest disease management sector with fatal outcomes in many places. However, the impact of COVID-19 and the digital experience perspective on Integrating Pest Management (IPM) is still yet to be understood. In Africa, the impact was devastating, mostly for the vulnerable smallholder farm households, who were rendered unable to access markets to purchase inputs and sell their produce during the lockdown period. By using a holistic approach the paper reviews different Information and Communications Technologies (ICTs), digitalization, and how this enhanced the capacity of smallholder farmers resilient, and inform their smart-IPM practices in order to improve food systems' amidst climate change during and in the post-COVID-19 period. Different digital modalities were adopted to ensure continuous food production, access to inputs and finances, and selling surplus production among others. This was largely possible by using ICTs to deliver these needed services digitally. The study shares contributions and capacity perspectives of ICTs for empowering smallholder farmers to boost the resilience of their food systems based on COVID-19 successful experiences. Thus digital solutions must be embraced in the delivery of extension service on pest management and good agronomic practices, money transfers for purchasing inputs, receiving payment for sold farm produce, and markets information exchange. These are key avenues through which digital solutions strategically supported smallholder-based food systems through the pandemic.
Abstract
No abstract has been registered
Authors
Kanan K. Saikai Celestine Oduori Evans Situma Simon Njoroge Ruth Murunde John W. Kimenju Douglas W. Miano Solveig Haukeland Danny CoyneAbstract
Coffee is an important commodity for Kenya, where production is steadily declining, despite a global rise in demand. Of the various constraints affecting production, plant-parasitic nematodes are a significant, but often overlooked, threat. As a perennial crop, treating plantations once infected with nematodes becomes difficult. The current study evaluated the drenching application of two biocontrol agents, Trichoderma asperellum and Purpureocillium lilacinum, for their nematode control efficacy, as well as their impact on the soil nematode community structure on mature, established coffee trees in Kenya. Seven Arabica coffee field trials were conducted over two years on trees of various ages. All the fields were heavily infested with Meloidogyne hapla, the first report of the species on coffee in Kenya. Both fungal biocontrol agents were detected endophytically infecting roots and recovered from soil but not until six months after initial applications. The population densities of M. hapla had significantly declined in roots of treated trees 12 months after the initial application, although soil nematode density data were similar across treatments. Based upon the maturity index and the Shannon index, treatment with T. asperellum led to improved soil health conditions and enrichment of diversity in the microbial community. Application of P. lilacinum, in particular, led to an increased abundance of fungivorous nematodes, especially Aphelenchus spp., for which P. lilacinum would appear to be a preferred food source. The soils in the trials were all stressed and denuded, however, which likely delayed the impact of such treatments or detection of any differences between treatments using indices, such as the functional metabolic footprint, over the period of study. A longer period of study would therefore likely provide a better indication of treatment benefits. The current study positively demonstrates, however, the potential for using biologically based options for the environmentally and climate-smart management of nematode threats in a sustainable manner on established, mature coffee plantations.
Authors
Margaret Nyaboke Nyang'au Komivi S. Akutse Khamis Fathiya Miriam Karwitha Charimbu Solveig HaukelandAbstract
Potato Cyst Nematodes (PCN) (Globodera rostochiensis and G. pallida Woll.) are quarantine pests of potato (Solanum tuberosum L.) worldwide capable of causing significant yield loss and difficult to manage with conventional methods. The study explored the diversity of antagonistic fungi associated with PCN obtained from soil samples collected in Nyandarua and Nakuru Counties in Kenya and their effect on PCN egg viability and hatching was also evaluated. Twelve fungal isolates from five genera were isolated and characterized using morphological and molecular techniques. The twelve isolates were Trichoderma asperellum (4), T. hamatum, T. breve, T. atrobruneum, Amanita basiorubra, Setophoma terrestris (2), Penicillium chrysogenum and Clonostachys rosea. The most abundant isolate was Trichoderma spp. with 58 % occurrence. The effect of seven of the isolates on PCN eggs showed that T. breve and P. chrysogenum reduced egg viability by 41 % and 34 %, respectively while T. asperellum and T. breve reduced their hatching by 50 % on average. Trichoderma atrobrunneum, T. hamatum, and A. basiorubra also reduced the PCN egg viability by 27 % on average. These fungal isolates could provide a potential tool for PCN management in potato production systems for improved yields. However, further studies are warranted to validate these findings under greenhouse and field conditions. A more comprehensive bioprospecting survey for PCN associated antagonistic fungi needs to be extended to other potato growing regions to explore further cyst pathogens.
Abstract
No abstract has been registered
Authors
James Kisaakye Hendrika Fourie Danny Coyne Laura Cortada Fathiya Mbarak Khamis Sevgan Subramanian Shirlyne Masinde Solveig HaukelandAbstract
The root-burrowing nematode, Radopholus similis, is reputedly the most damaging nematode pest of banana and responsible for major production losses. In this study, the endophytic potential of 13 fungal isolates was assessed for the management of R. similis in East African Highland bananas (‘Ng’ombe’). All isolates successfully colonised tissue-cultured banana roots, with isolates from Trichoderma, Fusarium and Hypocrea producing the highest (⩾49.1%) and Beauveria isolates the lowest (⩽14.4%) colonisation. The fungal endophytes T. asperellum (ICIPE 700) and H. lixii (ICIPE 697) were the most effective in reducing R. similis densities (>81%) relative to the non-inoculated control. However, the combined inoculation of ICIPE 700 and ICIPE 697 led to greater suppression of R. similis (>21%) relative to individual inoculation. Suppression of R. similis following inoculation of banana roots with ICIPE 700 and/or ICIPE 697 was associated with the significant upregulation of the defence-related gene PR-1, the cell signalling gene calmodulin Ca2+ and the cell-wall-strengthening gene β-1,3-glucan synthase. This study demonstrates the potential for nematode management in bananas with fungal endophytes, especially using the isolates ICIPE 700 and ICIPE 697 when combined.
Authors
Natthidech Beesa Buncha Chinnasri Anongnuch Sasnarukkit Tida Dethoup Kansiree Jindapunnapat Agnes W. Kiriga Kanan Saikai Solveig Haukeland Danny CoyneAbstract
The legume cavalcade, Centrosema pascuorum, is used extensively as a cover crop and as a component of conservation agriculture systems. It is also an attractive rotation or cover crop for the management of root-knot nematodes (RKN; Meloidogyne spp.) as it is a non-host. RKN are persistent pests that are well known to be difficult to control. However, the mechanisms governing the non-host status of cavalcade is unknown. The current study established that cavalcade leaves are toxic to RKN as either aqueous extracts or soil amendments. Bioassays conducted using Meloidogyne javanica showed that a 90% concentration of aqueous extract derived from 1-month-old cavalcade leaves (89 mg crude extract ml−1) suppressed nematode hatch (82.9%) and killed infective second-stage juveniles of M. javanica (85.3%). Soil amendments with 1% (w/w) of 1-month-old cavalcade leaves (0.99 mg crude extract g−1 soil) also provided effective control of M. javanica in the glasshouse on okra. One-month-old leaves appeared more effective than 2- or 3-month-old leaves. The soil amendments had no adverse phytotoxic effect on okra seed germination. Our study demonstrates the potential for using cavalcade leaves or extracts to manage RKN. This may be due to the nematicidal activity of the various compounds in the leaves, such as flavonoids, phenols and terpenoids, which should be further assessed.
Authors
Kuan Wang Bin Jiao Marit Almvik Fengshou Dong Xinglu Pan Xiaohu Wu Jun Xu Xingang Liu Yongquan ZhengAbstract
This study applied comprehensive two-dimensional gas chromatography time-of-flight mass spectrometry (GC × GC-TOF-MS) for the analysis of 100 pesticides (77 organophosphorus and 23 organochlorines) in six typical plant matrices with high protein, starch, acid, or oil content. Different sorbents were evaluated in the clean-up step of the QuEChERS method, and optimized sorbent combinations were obtained for each individual matrix. Good linearity of the calibration curves of matrix-matched was obtained (R2 ≥ 0.9853). The mean recoveries and relative standard deviations at fortification levels of 10 and 50 μg/kg ranged from 72.6 to 117.5 and 0.1 to 19.9%, respectively. Phenolic antioxidants, glycosides, phosphorus esters, linoleic acid, unsaturated fatty acids, and other interferences in the individual plant matrix were identified. The results demonstrated that GC × GC-TOF-MS is helpful in the separation of the co-eluted pesticides and the identification of interferences in complex plant matrices.
Abstract
Elymus repens is a problematic perennial weed in annual crops, grasslands and leys. Rhizome fragmentation by vertical disking can potentially reduce E. repens abundance with minimal tillage, but data are lacking on its efficiency in forage production. In a two-year study (2017–2018, 2018–2019) conducted in two forage grass-clover leys that were mostly weed-free except for large E. repens populations, this study examined effects on forage yield, botanical composition, and E. repens rhizome biomass of rhizome fragmentation at significant growth initiation in spring (early rhizome fragmentation, ERF) and/or when conditions allowed after the first forage cut (late rhizome fragmentation, LRF). Cold, wet springs and hard, dry soil in summer delayed treatment in both treatment years, to late spring (ERF) and late summer/early autumn (LRF). In the treatment year, ERF reduced first-cut forage yield by 44% compared with no rhizome fragmentation, while LRF decreased second- and third-cut yield by 24% and 53%, respectively. In the year after treatment, ERF increased total forage yield by on average 10%, while LRF had no effect. Over both years, combined forage yield was reduced by 11% by ERF and 4% by LRF. Both treatments reduced E. repens rhizome biomass, but inconsistently (ERF by 25% in one year only, LRF by 24% at one of two sites). ERF reduced E. repens incidence in forage by 10% in the treatment year, but had no effect in the following year. Thus, rhizome fragmentation by vertical disking can reduce E. repens abundance in grass-clover leys, but the effect is inconsistent and forage yield can be impaired, especially in swards with much E. repens. Moreover, disking is hampered by hard, dry soil conditions.