Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2021
Authors
Jorunn BørveAbstract
No abstract has been registered
Authors
Jorunn BørveAbstract
No abstract has been registered
Authors
Daina Grinbergs Javier Chilian Carla Hahn Marisol Reyes Mariana Isla Andres France Jorunn BørveAbstract
Silverleaf is an important fungal trunk disease of fruit crops, such as Japanese plum (Prunus salicina). It is known that infection by Chondrostereum purpureum results in discolored wood, “silvered” foliage, and tree decline. However, effects on fruit yield and quality have not been assessed. Therefore, the objectives of this study were to determine C. purpureum pathogenicity on P. salicina and the effects on physiology, fruit yield, and quality, in Chile, in 2019 and 2020. Wood samples from affected plum trees were collected in the Chilean plum productive area. Fungi were isolated by plating wood sections from the necrosis margin on culture media. Morphological and molecular characteristics of the isolates corresponded to C. purpureum (98%). Representative isolates were inoculated from healthy plum plants and after 65-d incubation, wood necrotic lesions and silver leaves were visible. Fungi were reisolated, fulfilling Koch’s postulates. To determine Silverleaf effects, xylem water potential and fruit yield and quality were measured in healthy and Silverleaf-diseased plum trees ‘Angeleno’. Water potential was altered in diseased trees, and fruit yield was reduced by 51% (2019) and by 41% (2020) compared to fruit from healthy trees. Moreover, cover-colour, equatorial-diameter, and weight were reduced, and fruit were softer, failing to meet the criteria to be properly commercialized and exported to demanding markets.
Abstract
Plant diseases may survive and be spread by infected seeds. In this study we monitored the longevity of 14 seed-borne pathogens in 9 crop species commonly grown in the Nordic countries, in addition to a sample of sclerotia of Sclerotinia sclerotiorum. The data from the first 30 years of a 100-year seed storage experiment located in a natural −3.5 °C environment (permafrost) in Svalbard, Norway, are presented. To date, the pathogens, tested by traditional seed health testing methods (freezing blotter, agar plates, growing on tests), have survived. Linear regression analyses showed that the seed infection percentages of Drechslera dictyoides in meadow fescue, Drechslera phlei in timothy, and Septoria nodorum in wheat were significantly reduced compared to the percentages at the start of the experiment (from 63% to 34%, from 70% to 65%, and from 15% to 1%, respectively), and that Phoma betae in beet had increased significantly (from 43% to 56%). No trends in the infection percentage were observed over the years in Drechslera spp. in barley (fluctuating between 30% and 64%) or in Alternaria brassicicola in cabbage (fluctuating between 82% and 99%), nor in pathogens with low seed infection percentages at the start of the experiment. A major part of the stored sclerotia was viable after 30 years. To avoid the spread of seed-borne diseases, it is recommended that gene banks implement routines that avoid the use of infected seeds.
Authors
Guro BrodalAbstract
No abstract has been registered
Authors
Kalev Adamson Marili Laas Kathrin Blumenstein Johanna Busskamp Gitta J. Langer Darta Klavina Anu Kaur Tiit Maaten Martin S. Mullett Michael M. Müller Emília Ondrušková Allar Padari Enn Pilt Taavi Riit Halvor Solheim Liina Soonvald Leho Tedersoo Eeva Terhonen Rein DrenkhanAbstract
Diplodia sapinea is a cosmopolitan endophyte and opportunistic pathogen having occurred on several conifer species in Europe for at least 200 years. In Europe, disease outbreaks have increased on several Pinus spp. in the last few decades. In this study, the genetic structure of the European and western Asian D. sapinea population were investigated using 13 microsatellite markers. In total, 425 isolates from 15 countries were analysed. A high clonal fraction and low genetic distance between most subpopulations was found. One single haplotype dominates the European population, being represented by 45.3% of all isolates and found in nearly all investigated countries. Three genetically distinct subpopulations were found: Central/North European, Italian and Georgian. The recently detected subpopulations of D. sapinea in northern Europe (Estonia) share several haplotypes with the German subpopulation. The northern European subpopulations (Latvia, Estonia and Finland) show relatively high genetic diversity compared to those in central Europe suggesting either that the fungus has existed in the North in an asymptomatic/endophytic mode for a long time or that it has spread recently by multiple introductions. Considerable genetic diversity was found even among isolates of a single tree as 16 isolates from a single tree resulted in lower clonal fraction index than most subpopulations in Europe, which might reflect cryptic sexual proliferation. According to currently published allelic patterns, D. sapinea most likely originates from North America or from some unsampled population in Asia or central America. In order to enable the detection of endophytic or latent infections of planting stock by D. sapinea, new species-specific PCR primers (DiSapi-F and Diplo-R) were designed. During the search for Diplodia isolates across the world for species specific primer development, we identified D. africana in California, USA, and in the Canary Islands, which are the first records of this species in North America and in Spain.
Abstract
Sporothrix (Sordariales, Ascomycota) is a well-supported monophyletic lineage within the Ophiostomatales, species of which occur in a diverse range of habitats including on forest trees, in the soil, associated with bark beetles and mites as well as on the fruiting bodies of some Basidiomycota. Several species have also been reported as important human and animal pathogens. During surveys of insect- and wound-associated Ophiostomatales from hardwood trees in Poland, many isolates with affinity to Sporothrix were recovered. In the present study, six undescribed Sporothrix spp. collected during these surveys are characterized based on their morphological characteristics and multi-locus phylogenenetic inference. They are described as Sporothrix cavum, Sporothrix cracoviensis, S. cryptarchum, S. fraxini, S. resoviensis, and S. undulata. Two of the Sporothrix spp. reside in the S. gossypina-complex, while one forms part of the S. stenoceras-complex. One Sporothrix sp. is a member of lineage F, and two other species grouped outside any of the currently defined species complexes. All the newly described species were recovered from hardwood habitats in association with sub-cortical insects, wounds or woodpecker cavities. These species were morphologically similar, with predominantly asexual states having hyaline or lightly pigmented conidia, which produce holoblastically on denticulate conidiogenous cells. Five of the new taxa produce ascomata with necks terminating in long ostiolar hyphae and allantoid ascospores without sheaths. The results suggest that Sporothrix species are common members of the Ophiostomatales in hardwood ecosystems of Poland.
Authors
Martin S. Mullett Rein Drenkhan Kalev Adamson Piotr Boroń Anna Lenart-Boroń Irene Barnes Michal Tomšovský Zuzana Jánošíková Katarína Adamčíková Emília Ondrušková Valentin Queloz Barbara Piskur Dmitry L. Musolin Kateryna Davydenko Margarita Georgieva Sophie Schmitz Audrius Kačergius Luisa Ghelardini Jelena Kranjec Orlović Michael Müller Funda Oskay Tine Hauptman Ágnes Halász Svetlana Markovskaja Halvor Solheim Martti Vuorinen Renate Heinzelmann Richard C. Hamelin Adam KonečnýAbstract
Dothistroma septosporum, the primary causal agent of Dothistroma needle blight, is one of the most significant foliar pathogens of pine worldwide. Its wide host and environmental ranges have led to its global success as a pathogen and severe economic damage to pine forests in many regions. This comprehensive global population study elucidated the historical migration pathways of the pathogen to reveal the Eurasian origin of the fungus. When over 3800 isolates were examined, three major population clusters were revealed: North America, Western Europe, and Eastern Europe, with distinct subclusters in the highly diverse Eastern European cluster. Modeling of historical scenarios using approximate Bayesian computation revealed the North American cluster was derived from an ancestral population in Eurasia. The Northeastern European subcluster was shown to be ancestral to all other European clusters and subclusters. The Turkish subcluster diverged first, followed by the Central European subcluster, then the Western European cluster, which has subsequently spread to much of the Southern Hemisphere. All clusters and subclusters contained both mating-types of the fungus, indicating the potential for sexual reproduction, although asexual reproduction remained the primary mode of reproduction. The study strongly suggests the native range of D. septosporum to be in Eastern Europe (i.e., the Baltic and Western Russia) and Western Asia.
Abstract
This study explores cell wall changes in Radiata pine (Pinus radiata) after modification with acetylation or furfurylation and subsequent prolonged subjection to the brown rot fungus R. placenta with the aim of better understanding the modus operandi of these two modifications. Both modifications have shown good durability in field tests, but in order to learn from their possible limitations, we used optimal environmental conditions for fungal growth, and extended the testing period compared to standard tests. Hyphae were found in acetylated wood after two weeks, and after 28 weeks of decay abundant amounts of encapsulated hyphae were present. In furfurylated wood, mass loss and a few hyphae were seen initially, but no further development was seen during weeks 18–42. The general degradation pattern was qualitatively the same for unmodified, acetylated and furfurylated wood: carbohydrates decreased relative to lignin. Acetyl groups were lost from acetylated wood during decay (earlier results), while the furan polymer did not seem to be altered by the fungus. Based on these findings it is hypothesized that modifications such as furfurylation that enhance moisture exclusion within the cell wall through impregnation polymerization offer better long term protection compared to modifications such as acetylation that depend on the replacement of hydroxyl groups with ether bound adducts that can be removed by fungi.
Abstract
We designed and deployed an apparatus to apply UV light for suppression of powdery mildew in open field production of strawberry. The unit was evaluated in a commercial production field for one season, and for two additional seasons in open field research plots at the University of Florida Gulf Coast Research and Education Center. The apparatus contained two 180-cm-long hemicylindrical arrays of twenty 55-W low-pressure discharge UV-C lamps (operated at 30 W; peak wavelength = 254 nm) backed by polished aluminum reflectors covering two adjacent beds of the strawberry planting. The lamp arrays were suspended within a steel carriage that was tractor-drawn through the planting at 2.3, 4.6, and 5.6 km h−1. Nighttime applications of UV-C at doses ranging from 65 to 170 J⋅m−2 either once or twice weekly provided suppression of foliar and fruit disease that was consistently equal to or better than that provided by a commercial calendar-based fungicide spray program.