Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2010
Abstract
We monitored the effects of the drought stress on 20-year old clones of Norway spruce (Picea abies) by using a range of instrumental methods. On two experimental plots (Hoxmark, Norway, 59°40\"14`N, 10°47\"36`E) the drought was induced in a period between May and October 2009 by removing the throughfall using the rain shelters and trenching. We collected data on soil moisture, stem and branch sap flow, xylem diameter, anatomical and calorimetric analysis of the needles, fine root biomass and dynamics and resistance to pathogens. Standard meteorological data were collected locally throughout the whole period. Here we present the preliminary analysis of sap flow and xylem diameter in a period 1-17 august 2009. The sap flow was measured on stems in the breast height by using the method of stem tissue heat balance (THB, EMS Brno). The values were measured once in 2 minutes and saved as the average of 10 minutes. The fluctuations in xylem diameter was monitored by using the automatic dendrometers DR26 (EMS Brno). We evaluated both diurnal and seasonal dynamics. Preliminary results show a significant difference in shape of diurnal curves of transpiration as well as different time lag among the sap flow and the potential evapo-transpiration. Also the differences in diurnal dynamics of the stem circumference suggested different xylem water potential in stressed and control trees. In the drought-stressed trees the diurnal fluctuation in stem diameter was about 4 times higher and the total stem increment one third lower, com-pared to the control trees.
Abstract
No abstract has been registered
Abstract
No abstract has been registered
Authors
Leif Sundheim Trond Hofsvang Christer Magnusson Trond Rafoss Arild Sletten Halvor Solheim Arne Stensvand Brita Toppe Anne Marte Tronsmo Bjørn ØklandAbstract
No abstract has been registered
Authors
Nadeem Yaqoob Jan Karlsson Benedicte Riber Albrectsen Halvor Solheim Carl Gunnar FossdalAbstract
Plants are exposed to a variety of pathogens in their natural habitats. To understand the key processes of defense responses in aspen (Populus tremulae) at the transcript level two clones C72 and C23 with differential level of resistance from the SwAsp collection were inoculated with a foliar rust (Melampsora magnusiana Wagnar). Leaf samples were collected from adjacent areas of the inoculation site to examine the long distance (systemic) defense responses at day1, day3 and day14 post treatments. We performed microarray experiments on the biothrophic interaction, on comparison with the healthy controls we found that the two clones respond in a widely different fashion to the rust. Clone C23 showed almost no response to biotroph after 24 hours while clone 72 gave a clear defense response to the pathogen. Quantitative reverse-transcriptase polymerase chain reaction (qRT-PCR) showed a significant differential expression patterns in susceptible and resistant colnes. Chitinase, cinnamic acid reductase and the iaa genes showed signification up-regulation in resistant clone. The level of expression was 5.9 delta threshold cycles in chitinase gene at day14. Data analysis from extracted total phenolics and condensed tannins verify the results of cDNA arrays and qRT-PCR.
Abstract
The Pasvik River valley is the easternmost part of Norway, and borders to Finland and Russia. In Norway it is known for its wilderness and taiga forests. During the 1960-1970s most of the mature pine forests were harvested, and large areas of pine stands have been naturally regenerated. In addition, large areas are covered with birch. The Pasvik River valley and the adjoining areas are therefore important both as an area for growing timber resources and for recreation. However, these areas have also been exposed to air pollution from Russian smelting industry since the 1930s. In addition to sulphur dioxide, emissions consist of various heavy metals which contaminate the surroundings. The main pollution source is the huge nickel plant in the Russian city Nikel, located only 10 km from the Norwegian border. For a long time there was general concern for the quality of the forest ecosystems in these areas. This concern accelerated in the mid-1980s.
Authors
Igor A. Yakovlev Ari M. Hietala Pierre-Emmanuel Courty Francis Martin Jan Stenlid Halvor Solheim Carl Gunnar FossdalAbstract
The genome H. annosum s.l. was sequenced by JGI to a 8.23X coverage and assembled into 39 scaffolds with a total size of 33.7 Mb covering more than 98% of the whole genome. Based of genome sequence we annotated a number of genes for fungal enzymes that are believed to participate in lignin degradation, including: laccases (Lcc18 genes), manganese peroxidases (MnP8 genes) and hydrogen peroxide forming enzymes such as glyoxal oxidases (GLOX5 genes), quinone oxidoreductases (QOR17 genes) and aryl alcohol oxidases (AAO16 genes), which is in concordance with these gene family sizes observed in other sequenced white-rot fungi. We studied the genomic organisation and phylogeny of these genes as well as their expression using NimbleGen arrays and qRT-PCR. Transcript profiling using whole-genome oligo arrays and qRT-PCR revealed that some transcripts were very abundant in lignin-rich media (Lcc5 15, MnP2, GLOX4, QOR2 10, AAO9), in cellulose-rich media (lcc2, 7 16, MnP3 4, GLOX3, QOR4 6, AAO2, 7 10), in wood (Lcc3, MnP4, QOR2, GLOX1, AAO10) or in the free-living mycelium grown liquid culture (Lcc1, 3, 10 13), suggesting specific functions of these genes, which need to be studied further.
Authors
Leif Sundheim Trond Hofsvang Christer Magnusson Trond Rafoss Arild Sletten Halvor Solheim Brita Toppe Anne Marte Tronsmo Bjørn ØklandAbstract
No abstract has been registered
Authors
Leif Sundheim May Bente Brurberg Trond Hofsvang Christer Magnusson Trond Rafoss Arild Sletten Birger Solberg Halvor Solheim Brita Toppe Anne Marte Tronsmo Bjørn ØklandAbstract
No abstract has been registered
Abstract
Traditional wood preservatives based on biocides are effective against wood-deteriorating organisms because of their toxicity. By contrast, modified woods are non-toxic by definition. To investigate the efficiency of various wood modifications, quantitative real-time polymerase chain reaction (qPCR) was used to profile the DNA amounts of the white-rot fungus Trametes versicolor (L.) [Lloyd strain CTB 863 A] during an 8-week-long growth period in treated Pinus sylvestris (L.) sapwood. The studied wood was modified by acetylation, furfurylation, and thermal treatment. The traditional wood preservatives bis-(N-cyclohexyldiazeniumdioxy)-copper (Cu-HDO) and chromated copper arsenate (CCA) were used as references, whereas untreated P. sylvestris (L.) sapwood served as a control. The maximum levels of fungal DNA in native wood occurred at the end of the experiment. For all wood treatments, the maximum fungal DNA level was recorded after an incubation period of 2 weeks, followed by a decline until the end of the trial. For the preservative-treated woods, Cu-HDO showed the lowest level of fungal DNA throughout the experiment, indicating that exploratory hyphal growth is limited owing to the phytotoxicity of the treatment. The other treatments did not inhibit the exploratory hyphal growth phase. We conclude that qPCR studies of hyphal growth patterns within wood should provide a powerful tool for evaluating and further optimizing new wood protection systems.