Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2023
Authors
Hang Su Andre van Eerde Espen Rimstad Ralph Bock Norica Branza-Nichita Igor A. Yakovlev Jihong Liu ClarkeAbstract
Plants provide not only food and feed, but also herbal medicines and various raw materials for industry. Moreover, plants can be green factories producing high value bioproducts such as biopharmaceuticals and vaccines. Advantages of plant-based production platforms include easy scale-up, cost effectiveness, and high safety as plants are not hosts for human and animal pathogens. Plant cells perform many post-translational modifications that are present in humans and animals and can be essential for biological activity of produced recombinant proteins. Stimulated by progress in plant transformation technologies, substantial efforts have been made in both the public and the private sectors to develop plant-based vaccine production platforms. Recent promising examples include plant-made vaccines against COVID-19 and Ebola. The COVIFENZ® COVID-19 vaccine produced in Nicotiana benthamiana has been approved in Canada, and several plant-made influenza vaccines have undergone clinical trials. In this review, we discuss the status of vaccine production in plants and the state of the art in downstream processing according to good manufacturing practice (GMP). We discuss different production approaches, including stable transgenic plants and transient expression technologies, and review selected applications in the area of human and veterinary vaccines. We also highlight specific challenges associated with viral vaccine production for different target organisms, including lower vertebrates (e.g., farmed fish), and discuss future perspectives for the field.
Abstract
Questions Observations in permanent forest vegetation plots in Norway and elsewhere indicate that complex changes have taken place over the period 1988–2020. These observations are summarised in the “climate-induced understorey change (CIUC)” hypothesis, i.e. that the understorey vegetation of old-growth boreal forests in Norway undergoes significant long-term changes and that these changes are consistent with the ongoing climate change as an important driver. Seven testable predictions were derived from the CIUC hypothesis. Location Norway. Methods Vegetation has been monitored in a total of 458 permanently marked plots, each 1 m2, in nine old-growth forest sites dominated by Picea abies at intervals of 5–8 years over the 32-year study period. For each of the 52 combinations of site and year, we obtained response variables for the abundance of single species, abundance and species density of taxonomic–ecological species groups and two size classes of cryptogams, and site species richness. All of these variables were subjected to linear regression modelling with site and year as predictors. Results Mean annual temperature, growing-season length and the number of days with precipitation were higher in the study period than in the preceding ca. 30-year period, resulting in increasingly favourable conditions for bryophyte growth. Site species richness decreased by 13% over the 32-year study period. On average, group abundance of vascular plants decreased by 24% (decrease in forbs: 38%). Patterns of group abundance change differed among cryptogam groups: although peat-moss abundance increased by 39%, the abundance of mosses, hepatics and lichens decreased by 13%, 49% and 67%, respectively. Group abundance of small cryptogams decreased by 61%, whereas a 13% increase was found for large cryptogams. Of 61 single species tested for abundance change, a significant decrease was found for 43 species, whereas a significant increase was found only for 6 species. Conclusions The major patterns of change in species richness, group species density and group abundance observed over the 32-year study period accord with most predictions from the CIUC hypothesis and are interpreted as direct and indirect responses to climate change, partly mediated through changes in the population dynamics of microtine rodents. The more favourable climate for bryophyte growth explains the observed increase for a few large bryophyte species, whereas the decrease observed for small mosses and hepatics is interpreted as an indirect amensalistic effect, brought about by shading and burial in mats of larger species and accelerated by reduced fine-scale disturbance by microtine rodents. Indirect effects of a thicker moss mat most likely drive the vascular plant decline although long-term effects of tree-stand dynamics and former logging cannot be completely ruled out. Our results suggest that the ongoing climate change has extensive, cascading effects on boreal forest ecosystems. The importance of long time-series of permanent vegetation plots for detecting and understanding the effects of climate change on boreal forests is emphasised.
Authors
Ana-Maria Madalina Pantazica Andre van Eerde Mihaela-Olivia Dobrica Iuliana Caras Irina Ionescu Adriana Costache Catalin Tucureanu Hege Særvold Steen Catalin Lazar Inger Heldal Sissel Haugslien Adrian Onu Crina Stavaru Norica Branza-Nichita Jihong Liu ClarkeAbstract
The recent SARS-CoV-2 pandemic has taught the world a costly lesson about the devastating consequences of viral disease outbreaks but also, the remarkable impact of vaccination in limiting life and economic losses. Vaccination against human Hepatitis B Virus (HBV), a major human pathogen affecting 290 million people worldwide, remains a key action towards viral hepatitis elimination by 2030. To meet this goal, the development of improved HBV antigens is critical to overcome non-responsiveness to standard vaccines based on the yeast-produced, small (S) envelope protein. We have recently shown that combining relevant immunogenic determinants of S and large (L) HBV proteins in chimeric antigens markedly enhances the anti-HBV immune response. However, the demand for cost-efficient, high-quality antigens remains challenging. This issue could be addressed by using plants as versatile and rapidly scalable protein production platforms. Moreover, the recent generation of plants lacking β-1,2-xylosyltransferase and α-1,3-fucosyltransferase activities (FX-KO), by CRISPR/Cas9 genome editing, enables production of proteins with “humanized” N-glycosylation. In this study, we investigated the impact of plant N-glycosylation on the immunogenic properties of a chimeric HBV S/L vaccine candidate produced in wild-type and FX-KO Nicotiana benthamiana. Prevention of β-1,2-xylose and α-1,3-fucose attachment to the HBV antigen significantly increased the immune response in mice, as compared with the wild-type plant-produced counterpart. Notably, the antibodies triggered by the FX-KO-made antigen neutralized more efficiently both wild-type HBV and a clinically relevant vaccine escape mutant. Our study validates in premiere the glyco-engineered Nicotiana benthamiana as a substantially improved host for plant production of glycoprotein vaccines.
2022
Authors
Simon Weldon Bert van der Veen Eva Farkas Nazli Pelin Kocatürk Schumacher Alba Dieguez-Alonso Alice Budai Daniel RasseAbstract
Sorption of nutrients such as NH4+ is often quoted as a critical property of biochar, explaining its value as a soil amendment and a filter material. However, published values for NH4+ sorption to biochar vary by more than 3 orders of magnitude, without consensus as to the source of this variability. This lack of understanding greatly limits our ability to use quantitative sorption measurements towards product design. Here, our objective was to conduct a quantitative analysis of the sources of variability, and infer which biochar traits are more favourable to high sorption capacity. To do so, we conducted a standardized remodelling exercise of published batch sorption studies using Langmuir sorption isotherm. We excluded studies presenting datasets that either could not be reconciled with the standard Langmuir sorption isotherm or generated clear outliers. Our analysis indicates that the magnitude of sorption capacity of unmodified biochar for NH4+ is lower than previously reported, with a median of 4.2 mg NH4+ g−1 and a maximum reported sorption capacity of 22.8 mg NH4+ g−1. Activation resulted in a significant relative improvement in sorption capacity, but absolute improvements remain modest, with a maximum reported sorption of 27.56 mg NH4+ g−1 for an activated biochar. Methodology appeared to substantially impact sorption estimates, especially practices such as pH control of batch sorption solution and ash removal. Our results highlight some significant challenges in the quantification of NH4+ sorption by biochar and our curated data set provides a potentially valuable scale against which future estimates can be assessed.
Abstract
No abstract has been registered
Authors
Daniel Rasse Simon Weldon Erik J. Joner Stephen Joseph Claudia I. Kammann Xiaoyu Liu Adam O'Toole Genxing Pan Nazli Pelin Kocatürk SchumacherAbstract
Background Biochar-based fertilizer products (BCF) have been reported to increase both crop yield and N-use efficiency. Such positive effects are often assumed to result from the slow-release of N adsorbed on BCF structures. However, a careful review of the literature suggests that actual mechanisms remain uncertain, which hampers the development of efficient BCF products. Scope Here, we aim at reviewing BCF mechanisms responsible for enhanced N uptake by plants, and evaluate the potential for further improvement. We review the capacity of biochar structures to adsorb and release N forms, the biochar properties supporting this effect, and the methods that have been proposed to enhance this effect. Conclusions Current biochar products show insufficient sorption capacity for the retention of N forms to support the production of slow-release BCFs of high enough N concentration. Substantial slow-release effects appear to require conventional coating technology. Sorption capacity can be improved through activation and additives, but currently not to the extent needed for concentrated BCFs. Positive effects of commercial BCFs containing small amount of biochar appear to result from pyrolysis-derived biostimulants. Our review highlights three prospects for improving N retention: 1) sorption of NH3 gas on specifically activated biochar, 2) synergies between biochar and clay porosities, which might provide economical sorption enhancement, and 3) physical loading of solid N forms within biochar. Beyond proof of concept, quantitative nutrient studies are needed to ascertain that potential future BCFs deliver expected effects on both slow-release and N use efficiency.
Abstract
No abstract has been registered
Authors
Anders AasAbstract
No abstract has been registered
Authors
Zhuoran Yu Christina L. Staudhammer Sparkle L. Malone Steven. F. Oberbauer Junbin Zhao Julia A. Cherry Gregory StarrAbstract
No abstract has been registered
Authors
Junbin ZhaoAbstract
No abstract has been registered