Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2010
Authors
Eivind Uleberg Theodorus MeuwissenAbstract
P>The effect on power and precision of including the causative SNP amongst the investigated markers in Quantitative Trait Loci (QTL) mapping experiments was investigated. Three fine mapping methods were tested to see which was most efficient in finding the causative mutation: combined linkage and linkage disequilibrium mapping (LLD); association mapping (MARK); a combination of LLD and association mapping (LLDMARK). Two simulated data sets were analysed: in one set, the causative SNP was included amongst the markers, while in the other set the causative SNP was masked between markers. Including the causative SNP amongst the markers increased both precision and power in the analyses. For the LLD method the number of correctly positioned QTL increased from 17 for the analysis without the causative SNP to 77 for the analysis including the causative SNP. The likelihood of the data analysis increased from 3.4 to 13.3 likelihood units for the MARK method when the causative SNP was included. When the causative SNP was masked between the analysed markers, the LLD method was most efficient in detecting the correct QTL position, while the MARK method was most efficient when the causative SNP was included as a marker in the analysis. The LLDMARK method, combining association mapping and LLD, assumes a QTL as the null hypothesis (using LLD method) and tests whether the 'putative causative SNP' explains significantly more variance than a QTL in the region. Thus, if the putative causative SNP does not only give an Identical-By-Descent (IBD) signal, but also an Alike-In-State (AIS) signal, LLDMARK gives a positive likelihood ratio. LLDMARK detected less than half as many causative SNPs as the other methods, and also had a relatively high false discovery rate when the QTL effect was large. LLDMARK may however be more robust against spurious associations, because the regional IBD is largely corrected for by fitting a QTL effect in the null hypothesis model.
Abstract
Norwegian agriculture is mainly dominated by grass-based milk and livestock production, so winter damage to overwintering grasses may have large economic consequences. We assessed the impact of climate change on the winter survival of timothy (Phleum pratense L) and perennial ryegrass (Lolium perenne L) under Norwegian conditions using agroclimatic indices and a simulation model of frost tolerance. This study was based on locally adjusted future climate scenarios (two for the period 2071-2100; one for the period 2020-2049) for six important agricultural regions, represented by one location each. We proposed and validated a rough way to estimate the daily minimum air temperatures from scenario data. compared with the control period 1961-1990, the future hardening period will be shortened by up to 21 days. As a consequence, the modelled maximum frost tolerance is expected to be reduced by up to 3.9 degrees C and 1.9 degrees C for timothy and perennial ryegrass, respectively, under the warmest scenario. In spite of this reduction, the plants are expected to be hardy enough to withstand the predicted autumn frosts, and we also expect a general reduction in the risk of winter frost injuries. The plant data available to this study suggest that agroclimatic indices developed for Canadian conditions can be useful for assessing the hardening status in timothy and perennial ryegrass. However, such indices are less suitable for assessing the risk of plant injury related to frost and ice encasement in Norway, since they do not account for the dynamics of cold adaptation. Although less snow is expected, in most cases this will not be accompanied by an increase in the risk of ice encasement injuries. However, a slight increase in the number of ice encasement events was predicted for one location. An earlier start of growth was predicted for all locations, accompanied at one coastal location by a slightly increased predicted risk of spring frosts. There is little risk of winter injuries related to frost and ice encasement in the hardier grass species timothy. The better overwintering conditions in general indicate that it will be possible to grow perennial ryegrass in areas where it is not grown today, provided the risk of fungal diseases does not increase. (C) 2010 Elsevier B.V. All rights reserved.
Abstract
Timothy (Phleum pratense L) is the most important forage grass in Scandinavia and it is therefore highly interesting to study how it will perform in a changing climate. In order to model winter survival, the dynamics of hardening and dehardening must be simulated with satisfactory precision. We investigated an early timothy frost tolerance model (LT50 model), and an LT50 model for winter wheat. Based on the assumption that timothy has no vernalization requirement, unlike winter wheat, but does have the ability to adapt to cold temperatures in a process linked to stage of development, two alternative versions of the winter wheat model were also constructed. In total, these four candidate models were calibrated by a Bayesian approach for the timothy cultivar Engmo. The candidate models were validated using independent observations on LT50 in timothy at different locations reflecting differences in climate. A sensitivity analysis, using the Morris method, to identify important model parameters suggested that there is a connection between frost tolerance and stage of plant development, even if there is no vernalization requirement. The simplified winter wheat model was selected as the best candidate model for LT50 in timothy based on model selection criteria and its ability to capture the hardening and dehardening processes. The results from the Bayesian calibration suggest that there are no major regional differences in Norway calling for regional calibration. However, cultivar-specific calibration is probably required, since there are hardy and less hardy cultivars within the same species. A functional LT50 model would allow risk assessments to be made of future winter survival using specifically tailored and downscaled climate scenarios. (C) 2010 Elsevier B.V. All rights reserved.
Abstract
Side effects related to liming have been studied in four dimictic lakes (553-642 ma.s.l.; 59 degrees 57'N) in Finnemarka, a forested area in Southern Norway with poor catchment buffer capacity. Data series from lake profiles have been sampled two decades apart; 10 years prior to liming and after 10 years of liming. Water samples were collected during spring after ice breakup and during summer after the development of thermal stratification. Before liming, there were very low concentrations of bicarbonate (HCO3-; or alkalinity) in the lakes. After 10 years of liming, up to 90% of the ions in hypolimnion originate from lime products. Hence, liming strengthened the chemical stratification and increased the vertical stability. Differences in chemocline developments between lakes were explained by differences in physical properties, i.e. their depth/surface area ratio. The chemocline developments lead to increased concentrations of organic matter in the hypolimnion with a subsequent reduction in oxygen concentrations. Lime additions during late spring, as an alternative to early autumn, lead to pronounced anoxic conditions in the hypolimnion.
Authors
Bringas Carlos M. Salas Tore Filbakk Geir Skjevrak Odd-Ivar Lekang Olav Høibø Reidar Barfod SchüllerAbstract
The effects of drying temperature and storage time on the compressibility and strength of Scots pine pellets were analysed in this article. Compressibility was not affected, whereas the highest pellet strength was obtained from the wood with longest storing and highest drying temperature.
Authors
Christian Sonne Jan Ove Bustnes Dorte Herzke Veerle Jaspers Adrian Covaci Duncan Halley Truls Moum Igor Eulaers Marcel Eens Rolf A. Ims Sveinn Are Hanssen Kjell E Erikstad Trond Johnsen Lisbeth Schnug Frank F. Rigét Asger Lundorff JensenAbstract
Organohalogen contaminants (OHCs) may affect various physiological parameters in birds including blood chemistry. We therefore examined blood plasma clinical-chemical parameters and OHCs in golden eagle, white-tailed eagle and goshawk chicks from Northern Norway. Correlation analyses on pooled data showed that alkaline phosphatase (ALKP), glucose and creatinine were significantly negatively correlated to various OHCs (all: p<0.05; r: -0.43 to -0.55; n=23), while alanine aminotransferase (ALAT), total protein, cholesterol, uric acid, total bilirubin, ratios protein:creatinine and uric acid:creatinine were significantly positively correlated to various OHCs (all: p<0.05; r: 0.43-0.96). Based on these relationships, we suggest that the OHC concentrations found in certain raptor chicks of Northern Scandinavia may impact blood plasma biochemistry in a way that indicates impacts on liver, kidney, bone, endocrinology and metabolism. In order to elaborate further on these relationships and mechanisms, we recommend that a larger study should take place in the near future.
Authors
Gudbrand Lien Subal C. Kumbhakar J. Brian HardakerAbstract
No abstract has been registered
Abstract
Scenarios of climate changes indicate longer and more frequent spells of mild weather during winter in northern latitudes. De-hardening in perennial grasses could increase the risk of frost kill. In this study, the resistance to de-hardening of different grass species and cultivars was examined, and whether the resistance changes during winter or between years, was tested. In Experiment 1, two cultivars of timothy (Phleum pratense L.) and perennial ryegrass (Lolium perenne L.) of contrasting winter hardiness were grown under ambient winter conditions, transferred from the field in January and April 2006 to the laboratory for 9 d with controlled de-hardening conditions of 3°C, 9°C and 15°C. The timothy cultivars were tested at 3°C, 6°C and 9°C in a similar experiment (Experiment 2) in January 2007. De-hardening, measured as decrease in frost tolerance (LT50), was less in timothy than in perennial ryegrass and increased with increasing temperatures. The northern winter-hardy cultivar Engmo of timothy de-hardened more rapidly than the less-hardy cultivar Grindstad, but had higher initial frost tolerance in both experiments, whereas there was less difference between cultivars of perennial ryegrass in Experiment 1. Cultivar Grindstad of timothy lost all hardiness in early spring at all temperatures, whereas cultivar Engmo maintained some hardiness at 3°C. Cultivar Engmo de-hardened at a lower rate in 2007 than in 2006, in spite of similar frost tolerance at the start of de-hardening treatment in both years. This indicates that the rate of de-hardening was controlled by factors additional to the initial frost tolerance and that autumn weather conditions might be important for the resistance to de-hardening.
Authors
Sebastian EiterAbstract
This article uses an activity-based understanding of landscape to explore values related to perceived land cover diversity. Perceptions within two user groups, members of landowner families and hiking tourists in a mountain area in western Norway, were related to a simultaneous land cover survey, and compared to experts' evaluations of land cover and to the aims of landscape protection in the area. Users perceived the area as being significantly more diverse and valuable than experts did, which stresses the importance of taking user perception into account in landscape protection and management. Some central landscape values were dependent upon land use outside the boundaries of the protected area. This illustrates that measures within structurally defined land units are not necessarily sufficient for maintenance of landscape values experienced by users. Land use in both respects, as an upholder of values and as a way of experiencing or perceiving them, should receive an increased role in the determination of management units.
Abstract
No abstract has been registered