Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2020
Authors
Fernanda de Cássia Neves Esteca Nina Trandem Ingeborg Klingen Jandir Cruz Santos Italo Delalibera Júnior Gilberto José de MoraesAbstract
In Norway, strawberry producers use cereal straw mulching to prevent berries from contacting the soil and to control weeds. We hypothesized that organic matter such as straw mulch also favors the maintenance of predatory mites which visit strawberry plants at nighttime. We compared mite diversity in cereal straw exposed for different periods in strawberry fields and evaluated their possible migration to plants in two experiments with potted plants in 2019. An ‘Early season’ experiment compared no mulching (T1), oat straw mulch exposed in field since 2018 (T2), or 2017 (T3), while a ‘Mid-season’ experiment compared no mulching (T1), barley straw mulch from 2018 (T2), or a mix from 2017 and 2018 (T3). To provide edaphic predatory mites with a potential source of food, all plants were infested with two-spotted spider mite (Tetranychus urticae Koch). Results suggested that straw mulch facilitates the prevalence of predatory mites in strawberry fields. Most predatory mite visits were at night, confirming our initial hypothesis. Predominant nocturnal mites on leaves belonged to Melicharidae (Proctolaelaps sp.) (‘Early season’, T2), Blattisociidae (Lasioseius sp.) (‘Early and Mid-season’, T3) and Phytoseiidae (‘Mid-season’, T2). Parasitus consanguineus Oudemans & Voigts was the predominant species (‘Early season’, T3) at the base of plants. Anystidae were diurnal visitors only (‘Mid-season’, T2). Future studies should evaluate the predation potential of Proctolaelaps sp. and Lasioseius sp. on two-spotted spider mite and other strawberry pests.
Authors
Shiori Koga Heidi Udnes Aamot Anne Kjersti Uhlen Till Seehusen Eva Veiseth-Kent Ingerd Skow Hofgaard Anette Moldestad Ulrike BöckerAbstract
This study aims to understand the environmental factors, focusing on rain and fungal infection, affecting the assembly of glutenin polymers during grain maturation. Spring wheat was grown in the field and grains were sampled from 50% grain moisture until maturity. Grain moisture content, protein content, size of glutenin polymers, the presence of proteases, and the amount of DNA from common wheat pathogenic fungi were analysed. Rain influenced the rate of grain desiccation that occurred parallel to the rate of glutenin polymer assembly. Rapid desiccation contributed to faster glutenin polymer assembly than gradual desiccation. Severe reduction in the glutenin polymer size coincided with increased grain moisture due to rain. Furthermore, increased fungal DNA followed by presence of gluten-degrading proteases was observed in the grain after humid conditions. The presence of gluten-degrading proteases was presumably involved in reducing the size of glutenin polymers in grain. Our study gave new insight into how environmental conditions could be associated with the assembly of glutenin polymers during grain maturation. The results suggest that rain and/or fungal proteases play an important role in reducing the molecular size of glutenin polymers.
Authors
Baiba Krivmane Ilze Šņepste Vilnis Šķipars Igor A. Yakovlev Carl Gunnar Fossdal Adam Vivian-Smith Dainis RuņģisAbstract
MicroRNAs (miRNAs) are non-protein coding RNAs of ~20–24 nucleotides in length that play an important role in many biological and metabolic processes, including the regulation of gene expression, plant growth and developmental processes, as well as responses to stress and pathogens. The aim of this study was to identify and characterize novel and conserved microRNAs expressed in methyl jasmonate-treated Scots pine needles. In addition, potential precursor sequences and target genes of the identified miRNAs were determined by alignment to the Pinus unigene set. Potential precursor sequences were identified using the miRAtool, conserved miRNA precursors were also tested for the ability to form the required stem-loop structure, and the minimal folding free energy indexes were calculated. By comparison with miRBase, 4975 annotated sequences were identified and assigned to 173 miRNA groups, belonging to a total of 60 conserved miRNA families. A total of 1029 potential novel miRNAs, grouped into 34 families were found, and 46 predicted precursor sequences were identified. A total of 136 potential target genes targeted by 28 families were identified. The majority of previously reported highly conserved plant miRNAs were identified in this study, as well as some conserved miRNAs previously reported to be monocot specific. No conserved dicot-specific miRNAs were identified. A number of potential gymnosperm or conifer specific miRNAs were found, shared among a range of conifer species.
Authors
Henri E. Z. Tonnang Ritter Atoundem Guimapi Anani Y. Bruce Dan Makumbi Bester T. Mudereri Tesfaye Balemi Peter CraufurdAbstract
Understanding the detailed timing of crop phenology and their variability enhances grain yield and quality by providing precise scheduling of irrigation, fertilization, and crop protection mechanisms. Advances in information and communication technology (ICT) provide a unique opportunity to develop agriculture-related tools that enhance wall-to-wall upscaling of data outputs from point-location data to wide-area spatial scales. Because of the heterogeneity of the worldwide agro-ecological zones where crops are cultivated, it is unproductive to perform plant phenology research without providing means to upscale results to landscape-level while safeguarding field-scale relevance. This paper presents an advanced, reproducible, and open-source software for plant phenology prediction and mapping (PPMaP) that inputs data obtained from multi-location field experiments to derive models for any crop variety. This information can then be applied consecutively at a localized grid within a spatial framework to produce plant phenology predictions at the landscape level. This software runs on the ‘Windows’ platform and supports the development of process-oriented and temperature-driven plant phenology models by intuitively and interactively leading the user through a step-by-step progression to the production of spatial maps for any region of interest in sub-Saharan Africa. Maize (Zea mays L.) was used to demonstrate the robustness, versatility, and high computing efficiency of the resulting modeling outputs of the PPMaP. The framework was implemented in R, providing a flexible and easy-to-use GUI interface. Since this allows for appropriate scaling to the larger spatial domain, the software can effectively be used to determine the spatially explicit length of growing period (LGP) of any variety.
Abstract
No abstract has been registered
Authors
Mohamed Ibrahim Mohamed Abdelhalim May Bente Brurberg Ingerd Skow Hofgaard Odd Arne Rognli Anne Marte TronsmoAbstract
Microdochium majus and Microdochium nivale cause serious disease problems in grasses and cereal crops in the temperate regions. Both fungi can infect the plants during winter (causing pink snow mould) as well as under cool humid conditions during spring and fall. We conducted a pathogenicity test of 15 M. nivale isolates and two M. majus isolates from Norway at low temperature on four different grass cultivars of Lolium perenne and Festulolium hybrids. Significant differences between M. nivale isolates in the ability to cause pink snow mould were detected. The M. nivale strains originally isolated from grasses were more pathogenic than isolates from cereals. The genetic diversity of M. nivale and M. majus isolates was studied by sequencing four genetic regions; Elongation factor-1 alpha (EF-1α), β-tubulin, RNA polymerase II (RPB2) and the Internal Transcribed Spacer (ITS). Phylogenetic trees based on the sequences of these four genetic regions resolved M. nivale and M. majus isolates into separate clades. Higher genetic diversity was found among M. nivale isolates than among M. majus isolates. M. nivale isolates revealed genetic differences related to different host plants (grasses vs. cereals) and different geographic regions (Norway and UK vs. North America). Sequence results from the RPB2 and β-tubulin genes were more informative than those from ITS and EF-1α. The genetic and phenotypic differences detected between Norwegian M. nivale isolates from cereals and grasses support the assumption that host specialization exist within M. nivale isolates.
Authors
Olalla Díaz-Yáñez Blas Mola-Yudego Volkmar Timmermann Mari Mette Tollefsrud Ari Hietala Jonas OlivaAbstract
Determining the impacts of invasive pathogens on tree mortality and growth is a difficult task, in particular in the case of species occurring naturally at low frequencies in mixed stands. In this study, we quantify such effects by comparing national forest inventory data collected before and after pathogen invasion. In Norway, Fraxinus excelsior is a minor species representing less than 1% of the trees in the forests and being attacked by the invasive pathogen Hymenoscyphus fraxineus since 2006. By studying deviations between inventories, we estimated a 74% higher-than-expected average ash mortality and a 13% slower-than-expected growth of the surviving ash trees, indicating a lack of compensation by the remaining ash. We could confidently assign mortality and growth losses to ash dieback as no mortality or growth shifts were observed for co-occurring tree species in the same plots. The mortality comparisons also show regional patterns with higher mortality in areas with the longest disease history in Norway. Considering that ash is currently mostly growing in mixed forests and that no signs of compensation were observed by the surviving ash trees, a significant habitat loss and niche replacement could be anticipated in the mid-term.
Authors
Carlos Sacristan Carlos G Das Neves Faisal Suhel Irene Sacristán Torstein Tengs Inger Sofie Hamnes Knut Ivar Engesæter MadslienAbstract
Bartonella spp. are fastidious, Gram‐negative, aerobic, facultative intracellular bacteria that infect humans, domestic and wild animals. In Norway, Bartonella spp. have been detected in cervids, mainly within the distribution area of the arthropod vector deer ked (Lipoptena cervi ). We used PCR to survey the prevalence of Bartonella spp. in blood samples from 141 cervids living outside the deer ked distribution area (moose [Alces alces , n = 65], red deer [Cervus elaphus , n = 41], and reindeer [Rangifer tarandus , n = 35]), in 44 pool samples of sheep tick (Ixodes ricinus , 27 pools collected from 74 red deer and 17 from 45 moose) and in biting midges of the genus Culicoides (Diptera: Ceratopogonidae, 120 pools of 6710 specimens). Bartonella DNA was amplified in moose (75.4 %, 49/65) and in red deer (4.9 %, 2/41) blood samples. All reindeer were negative. There were significant differences in Bartonella prevalence among the cervid species. Additionally, Bartonella was amplified in two of 17 tick pools collected from moose and in 3 of 120 biting midge pool samples. The Bartonella sequences amplified in moose, red deer and ticks were highly similar to B. bovis , previously identified in cervids. The sequence obtained from biting midges was only 81.7 % similar to the closest Bartonella spp. We demonstrate that Bartonella is present in moose across Norway and present the first data on northern Norway specimens. The high prevalence of Bartonella infection suggests that moose could be the reservoir for this bacterium. This is the first report of bacteria from the Bartonella genus in ticks from Fennoscandia, and in Culicoides biting midges worldwide.
Authors
Martin Pettersson Venche Talgø Odd Ragnar Johnskås Jan-Ole Skage Torfinn Torp Inger Sundheim FløistadAbstract
Norway spruce (Picea abies) is a widely used Christmas tree species in the Nordic countries. Postharvest needle retention is an important characteristic for Christmas trees and compared to many fir (Abies) species, Norway spruce has poor postharvest needle retention. This trait is one of the most important qualities in choice of natural versus plastic trees. In this study, current year shoots were cut from 30 Norway spruce seedlot sources, including the most widely used Norwegian Christmas tree provenances, and tested to identify genetic variation in postharvest needle retention. Current year shoots were collected from one field in November and December 2018, and from three fields in October, November and December 2019. The current year shoots were displayed indoors under controlled conditions and allowed to dry. Differences in postharvest needle retention were seen between seedlots, harvesting dates and locations. Our study indicates possibilities of selecting for improved postharvest needle retention in Norway spruce seed sources. Furthermore, postharvest needle retention should be considered as one characteristic to add in the ongoing Norway spruce Christmas tree breeding program.
Authors
Franca G. Rossi Belachew Asalf Tadesse Chloé Grieu Rodrigo B. Onofre Natalia A. Peres David M. Gadoury Arne StensvandAbstract
In a number of pathosystems involving the powdery mildews (Erysiphales), plant stress is associated with decreased disease susceptibility and is detrimental to pathogen growth and reproduction. However, in strawberry, anecdotal observations associate severe powdery mildew (Podosphaera aphanis) with water stress. In a 2017 survey of 42 strawberry growers in Norway and California, 40 growers agreed with a statement that water-stressed strawberry plants were more susceptible to powdery mildew compared with nonstressed plants. In repeated in vitro and in vivo experiments, we found that water stress was consistently and significantly unfavorable to conidial germination, infection, and increases in disease severity. Deleterious effects on the pathogen were observed from both preinoculation and postinoculation water stress in the host. Soil moisture content in the range from 0 to 50% was correlated (R2 = 0.897) with germinability of conidia harvested from extant colonies that developed on plants growing at different levels of water stress. These studies confirm that P. aphanis fits the norm for biotrophic powdery mildews and hosts under stress. Mild water stress, compared with a state of optimal hydration, is likely to decrease rather than increase susceptibility of strawberry to P. aphanis. We believe it is possible that foliar symptoms of leaf curling due to diffuse and inconspicuous infection of the lower leaf surfaces by P. aphanis could easily be mistakenly attributed to water stress, which we observed as having a nearly identical leaf curling symptom in strawberry.