Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2023
Authors
Yupeng Zhang Guangxun Fan Tuomas Toivainen Torstein Tengs Igor A. Yakovlev Paal Krokene Timo Hytönen Carl Gunnar Fossdal Paul GriniAbstract
Plants must adapt with increasing speed to global warming to maintain their fitness. One rapid adaptation mechanism is epigenetic memory, which may provide organisms sufficient time to adapt to climate change. We studied how the perennial Fragaria vesca adapted to warmer temperatures (28°C vs. 18°C) over three asexual generations. Differences in flowering time, stolon number, and petiole length were induced by warmer temperature in one or more ecotypes after three asexual generations and persisted in a common garden environment. Induced methylome changes differed between the four ecotypes from Norway, Iceland, Italy, and Spain, but shared methylome responses were also identified. Most differentially methylated regions (DMRs) occurred in the CHG context, and most CHG and CHH DMRs were hypermethylated at the warmer temperature. In eight CHG DMR peaks, a highly similar methylation pattern could be observed between ecotypes. On average, 13% of the differentially methylated genes between ecotypes also showed a temperature-induced change in gene expression. We observed ecotype-specific methylation and expression patterns for genes related to gibberellin metabolism, flowering time, and epigenetic mechanisms. Furthermore, we observed a negative correlation with gene expression when repetitive elements were found near (±2 kb) or inside genes. In conclusion, lasting phenotypic changes indicative of an epigenetic memory were induced by warmer temperature and were accompanied by changes in DNA methylation patterns. Both shared methylation patterns and transcriptome differences between F. vesca accessions were observed, indicating that DNA methylation may be involved in both general and ecotype-specific phenotypic variation.
Authors
Bikal GhimireAbstract
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Authors
Monica Sanden Eirill Ager-Wick Johanna Eva Bodin Nur Duale Kristian Prydz Volha Shapaval Tage ThorstensenAbstract
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Authors
Line Nybakken YeonKyeong Lee Dag Anders Brede Melissa Magerøy Ole Christian Lind Brit Salbu Valerii Kashparov Jorunn Elisabeth OlsenAbstract
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Authors
Jana Fránová Jaroslava Pribylová Rostislav Zemek Jiunn Luh Tan Zhibo Hamborg Dag-Ragnar Blystad Ondrej Lenz Igor KoloniukAbstract
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Authors
Susanne ZazzeraAbstract
MAMN-BIO MAMN-HAVSJ
Authors
Marianne Stenrød Kathinka Lang Marit Almvik Roger Holten Agnethe Christiansen Xingang Liu Qiu JingAbstract
To ensure compliance with food safety regulations, monitoring programs and reliable analytical methods to detect relevant chemical pollutants in food and the environment are key instruments. Pesticides are an important part of pest management in agriculture to sustain and increase crop yields and control post-harvest decay, while pesticide residues in food may pose a risk to human health. Thus, the levels of pesticide residues in food must be controlled and should align with Maximum Residue Levels regulations to ensure food safety. Food safety monitoring programs and analytical methods for pesticide residues and metabolites are well developed. Future developments to ensure food safety must include the increased awareness and improved regulatory framework to meet the challenges with natural toxins, emerging contaminants, novel biopesticides, and antimicrobial resistance in food and the environment. The reality of a complex mixture of pollutants, natural toxins, and their metabolites potentially occurring in food and the environment implies the necessity to consider combined effects of chemicals in risk assessment. Here, we present challenges, monitoring efforts, and future perspectives for chemical food safety focused on the importance of current developments in high-resolution mass spectrometry (HRMS) technologies to meet the needs in food safety and environmental monitoring.