Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2021
Authors
Maria Papale Carmen Rizzo Gabriella Caruso Stefano Amalfitano Giovanna Maimone Stefano Miserocchi Rosabruna La Ferla Paul Eric Aspholm Franco Decembrini Filippo Azzaro Antonella Conte Marco Graziano Alessandro Ciro Rappazzo Angelina Lo Giudice Maurizio AzzaroAbstract
The effects of climate change-induced ice melting on the microbial communities in different glacial-fed aquatic systems have been reported, but seasonal dynamics remain poorly investigated. In this study, the structural and functional traits of the aquatic microbial community were assessed along with the hydrological and biogeochemical variation patterns of the Arctic Pasvik River under riverine and brackish conditions at the beginning (May = Ice-melt (−)) and during the ice-melting season (July = Ice-melt (+)). The microbial abundance and morphometric analysis showed a spatial diversification between the riverine and brackish stations. Results highlighted different levels of microbial respiration and activities with different carbon and phosphorous utilization pathways, thus suggesting an active biogeochemical cycling along the river especially at the beginning of the ice-melting period. At Ice-melt (−), Gammaproteobacteria and Alphaproteobacteria were dominant in riverine and brackish stations, respectively. Conversely, at Ice-melt (+), the microbial community composition was more homogeneously distributed along the river (Gammaproteobacteria > Alphaproteobacteria > Bacteroidetes). Our findings provide evidence on how riverine microbial communities adapt and respond to seasonal ice melting in glacial-fed aquatic ecosystems.
Abstract
Communication to JordPro AS about the research status regarding the use of biochar as an ingredient in organic fertilizer products.
Authors
Carla Cruz-Paredes Tomas Diera Marie Louise Davey Maria Monrad Rieckmann Peter Christensen Majbrit Dela Cruz Kristian Holst Laursen Erik J. Joner Jan H. Christensen Ole Nybroe Iver JakobsenAbstract
Arbuscular mycorrhizal fungi (AMF) are important in plant nutrient uptake, but their function is prone to environmental constraints including soil factors that may suppress AMF transfer of phosphorus (P) from the soil to the plant. The objective of this study was to disentangle the biotic and abiotic components of AMF-suppressive soils. Suppression was measured in terms of AMF-mediated plant uptake of 33P mixed into a patch of soil and treatments included soil sterilization, soil mixing, pH manipulation and inoculation with isolated soil fungi. The degree of suppression was compared to volatile organic compound (VOC) production by isolated fungi and to multi-element analysis of soils. For a selected suppressive soil, sterilization and soil mixing experiments confirmed a biotic component of suppression. A Fusarium isolate from that soil suppressed the AMF activity and produced greater amounts than other fungal isolates of the antimicrobial VOC trichodiene (a trichothecene toxin precursor), beta-chamigrene, alpha-cuprenene and p-xylene. These metabolites deserve further attention when unravelling the chemical background behind the suppression of AMF activity by soil microorganisms. For the abiotic component of suppression, soil liming and acidification experiments confirmed that suppression was strongest at low pH. The pH effect might be associated with changed availability of specific suppressive elements. Indeed 33P uptake from the soil patches correlated negatively to Al levels and Al toxicity seems to play a major role in the AMF suppressiveness at pH below 5.0–5.2. However, the documentation of a biotic component of suppression for both low and high pH soils leads to the conclusion that biotic and abiotic components of suppression may act in parallel in some soils. The current insight into the components of soil suppressiveness of the AMF activity aids to develop management practices that allow for optimization of AMF functionality.
Authors
Amy Lusher Rachel Hurley Hans Peter H Arp Andy Booth Inger Lise Nerland Bråte Geir W. Gabrielsen Alessio Gomiero Tania Gomes Bjørn Einar Grøsvik Norman Green Marte Haave Ingeborg G. Hallanger Claudia Halsband Dorte Herzke Erik J. Joner Tanja Kögel Kirsten Rakkestad Sissel B. Ranneklev Martin Wagner Marianne OlsenAbstract
Given the increasing attention on the occurrence of microplastics in the environment, and the potential envi-ronmental threats they pose, there is a need for researchers to move quickly from basic understanding to applied science that supports decision makers in finding feasible mitigation measures and solutions. At the same time, they must provide sufficient, accurate and clear information to the media, public and other relevant groups (e.g., NGOs). Key requirements include systematic and coordinated research efforts to enable evidence-based decision making and to develop efficient policy measures on all scales (national, regional and global). To achieve this, collaboration between key actors is essential and should include researchers from multiple disciplines, policy-makers, authorities, civil and industry organizations, and the public. This further requires clear and informative communication processes, and open and continuous dialogues between all actors. Cross-discipline dialogues between researchers should focus on scientific quality and harmonization, defining and accurately communi-cating the state of knowledge, and prioritization of topics that are critical for both research and policy, with the common goal to establish and update action plans for holistic benefit. In Norway, cross-sectoral collaboration has been fundamental in supporting the national strategy to address plastic pollution. Researchers, stakeholders and the environmental authorities have come together to exchange knowledge, identify knowledge gaps, and set targeted and feasible measures to tackle one of the most challenging aspects of plastic pollution: microplastic. In this article, we present a Norwegian perspective on the state of knowledge on microplastic research efforts. Norway’s involvement in international efforts to combat plastic pollution aims at serving as an example of how key actors can collaborate synergistically to share knowledge, address shortcomings, and outline ways forward to address environmental challenges.
Authors
Xiao Huang Hanna Marika Silvennoinen Bjørn Kløve Kristiina Regina Tanka P. Kandel Arndt Piayda Sandhya Karki Poul Erik Lærke Mats HöglindAbstract
Cultivated peatlands under drainage practices contribute significant carbon losses from agricultural sector in the Nordic countries. In this research, we developed the BASGRA-BGC model coupled with hydrological, soil carbon decomposition and methane modules to simulate the dynamic of water table level (WTL), carbon dioxide (CO2) and methane (CH4) emissions for cultivated peatlands. The field measurements from four experimental sites in Finland, Denmark and Norway were used to validate the predictive skills of this novel model under different WTL management practices, climatic conditions and soil properties. Compared with daily observations, the model performed well in terms of RMSE (Root Mean Square Error; 0.06–0.11 m, 1.22–2.43 gC/m2/day, and 0.002–0.330 kgC/ha/day for WTL, CO2 and CH4, respectively), NRMSE (Normalized Root Mean Square Error; 10.3–18.3%, 13.0–18.6%, 15.3–21.9%) and Pearson's r (Pearson correlation coefficient; 0.60–0.91, 0.76–0.88, 0.33–0.80). The daily/seasonal variabilities were therefore captured and the aggregated results corresponded well with annual estimations. We further provided an example on the model's potential use in improving the WTL management to mitigate CO2 and CH4 emissions while maintaining grass production. At all study sites, the simulated WTLs and carbon decomposition rates showed a significant negative correlation. Therefore, controlling WTL could effectively reduce carbon losses. However, given the highly diverse carbon decomposition rates within individual WTLs, adding indi-cators (e.g. soil moisture and peat quality) would improve our capacity to assess the effectiveness of specificmitigation practices such as WTL control and rewetting.
Authors
Ana-Maria Madalina Pantazica Lia-Maria Cucos Crina Stavaru Jihong Liu Clarke Norica Branza-NichitaAbstract
Hepatitis B and C viruses chronically affect approximately 3.5% of the global population, causing more than 800,000 deaths yearly due to severe liver pathogenesis. Current HBV vaccines have significantly contributed to the reduction of chronic HBV infections, supporting the notion that virus eradication is a feasible public health objective in the near future. In contrast to HBV, a prophylactic vaccine against HCV infection is not available yet; however, intense research efforts within the last decade have significantly advanced the field and several vaccine candidates are shortlisted for clinical trials. A successful vaccine against an infectious disease of global importance must not only be efficient and safe, but also easy to produce, distribute, administer, and economically affordable to ensure appropriate coverage. Some of these requirements could be fulfilled by oral vaccines that could complement traditional immunization strategies. In this review, we discuss the potential of edible plant-based oral vaccines in assisting the worldwide fight against hepatitis B and C infections. We highlight the latest research efforts to reveal the potential of oral vaccines, discuss novel antigen designs and delivery strategies, as well as the limitations and controversies of oral administration that remain to be addressed to make this approach successful.
Authors
Qianwen Ding Zhen Zhang Yu Li Hongliang Liu Qiang Hao Yalin Yang Einar Ringø Rolf Erik Olsen Jihong Liu Clarke Chao Ran Zhigang ZhouAbstract
Propionate and propionyl-CoA accumulation have been associated with the development of mitochondrial dysfunction. In this study, we show that propionate induces intestinal damage in zebrafish when fed a high-fat diet (HFD). The intestinal damage was associated with oxidative stress owing to compromised superoxide dismutase 2 (Sod2) activity. Global lysine propionylation analysis of the intestinal samples showed that Sod2 was propionylated at lysine 132 (K132), and further biochemical assays demonstrated that K132 propionylation suppressed Sod2 activity. In addition, sirtuin 3 (Sirt3) played an important role in regulating Sod2 activity via modulating de-propionylation. Finally, we revealed that intestinal oxidative stress resulting from Sod2 propionylation contributed to compositional change of gut microbiota. Collectively, our results in this study show that there is a link between Sod2 propionylation and oxidative stress in zebrafish intestines and highlight the potential mechanism of intestinal problems associated with high propionate levels.
Authors
Martin Forsius Maximilian Posch Maria Holmberg Jussi Vuorenmaa Sirpa Kleemola Algirdas Augustaitis Burkhard Beudert Witold Bochenek Nicholas Clarke Heleen de Wit Thomas Dirnböck Jane Frey Ulf Grandin Hannele Hakola Johannes Kobler Pavel Krám Antti-Jussi Lindroos Stefan Löfgren Tomasz Pecka Pernilla Rönnback Krzysztof Skotak Józef Szpikowski Liisa Ukonmaanaho Salar Valinia Milan VáňaAbstract
Anthropogenic emissions of nitrogen (N) and sulphur (S) compounds and their long-range transport have caused widespread negative impacts on different ecosystems. Critical loads (CLs) are deposition thresholds used to describe the sensitivity of ecosystems to atmospheric deposition. The CL methodology has been a key science-based tool for assessing the environmental consequences of air pollution. We computed CLs for eutrophication and acidification using a European long-term dataset of intensively studied forested ecosystem sites (n = 17) in northern and central Europe. The sites belong to the ICP IM and eLTER networks. The link between the site-specific calculations and time-series of CL exceedances and measured site data was evaluated using long-term measurements (1990–2017) for bulk deposition, throughfall and runoff water chemistry. Novel techniques for presenting exceedances of CLs and their temporal development were also developed. Concentrations and fluxes of sulphate, total inorganic nitrogen (TIN) and acidity in deposition substantially decreased at the sites. Decreases in S deposition resulted in statistically significant decreased concentrations and fluxes of sulphate in runoff and decreasing trends of TIN in runoff were more common than increasing trends. The temporal developments of the exceedance of the CLs indicated the more effective reductions of S deposition compared to N at the sites. There was a relation between calculated exceedance of the CLs and measured runoff water concentrations and fluxes, and most sites with higher CL exceedances showed larger decreases in both TIN and H+ concentrations and fluxes. Sites with higher cumulative exceedance of eutrophication CLs (averaged over 3 and 30 years) generally showed higher TIN concentrations in runoff. The results provided evidence on the link between CL exceedances and empirical impacts, increasing confidence in the methodology used for the European-scale CL calculations. The results also confirm that emission abatement actions are having their intended effects on CL exceedances and ecosystem impacts.
Abstract
No abstract has been registered
Authors
Nicholas ClarkeAbstract
No abstract has been registered