Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2023
Abstract
No abstract has been registered
Authors
Junbin Zhao Mikhail Mastepanov Cornelya Klutsch Tobias Daugaard-Petersen Hanna Marika SilvennoinenAbstract
No abstract has been registered
2022
Authors
Simo Maduna Adam Vivian-Smith Ólöf Dóra Bartels Jónsdóttir Albert Imsland Cornelya Klutsch Tommi Nyman Hans Geir Eiken Snorre HagenAbstract
We determined the mitogenome of Cyclopterus lumpus using a hybrid sequencing approach, and another four closely related species in the Liparidae based on available next-generation sequence data. We found that the mitogenome of C. lumpus was 17,266 bp in length, where the length and organisation were comparable to those reported for cottoids. However, we found a GC-homopolymer region in the intergenic space between tRNALeu2 and ND1 in liparids and cyclopterids. Phylogenetic reconstruction confirmed the monophyly of infraorders and firmly supported a sister-group relationship between Cyclopteridae and Liparidae. Purifying selection was the predominant force in the evolution of cottoid mitogenomes. There was significant evidence of relaxed selective pressures along the lineage of deep-sea fish, while selection was intensified in the freshwater lineage. Overall, our analysis provides a necessary expansion in the availability of mitogenomic sequences and sheds light on mitogenomic adaptation in Cottoidei fish inhabiting different aquatic environments.
Authors
Paul Eric Aspholm Simo Maduna Juho Matti Vuolteenaho Cornelya Klutsch Hallvard Jensen Ida Marie Bardalen Fløystad Ingrid Helle Søvik Ane-Sofie Bednarczyk Hansen Benedicte Beddari Helena Klöckener Snorre HagenAbstract
No abstract has been registered
Authors
Cornelya Klutsch Simo Maduna Natalia Polikarpova Kristin Forfang Benedicte Beddari Karl Øystein Gjelland Paul Eric Aspholm Per-Arne Amundsen Snorre HagenAbstract
No abstract has been registered
Authors
Tommi Nyman Saskia Wutke Elina Koivisto Tero Klemola Mark R. Shaw Tommi Andersson Håkon Haraldseide Snorre Hagen Ryosuke Nakadai Kai RuohomäkiAbstract
Large areas of forests are annually damaged or destroyed by outbreaking insect pests. Understanding the factors that trigger and terminate such population eruptions has become crucially important, as plants, plant-feeding insects, and their natural enemies may respond differentially to the ongoing changes in the global climate. In northernmost Europe, climate-driven range expansions of the geometrid moths Epirrita autumnata and Operophtera brumata have resulted in overlapping and increasingly severe outbreaks. Delayed density-dependent responses of parasitoids are a plausible explanation for the 10-year population cycles of these moth species, but the impact of parasitoids on geometrid outbreak dynamics is unclear due to a lack of knowledge on the host ranges and prevalences of parasitoids attacking the moths in nature. To overcome these problems, we reviewed the literature on parasitism in the focal geometrid species in their outbreak range and then constructed a DNA barcode reference library for all relevant parasitoid species based on reared specimens and sequences obtained from public databases. The combined recorded parasitoid community of E. autumnata and O. brumata consists of 32 hymenopteran species, all of which can be reliably identified based on their barcode sequences. The curated barcode library presented here opens up new opportunities for estimating the abundance and community composition of parasitoids across populations and ecosystems based on mass barcoding and metabarcoding approaches. Such information can be used for elucidating the role of parasitoids in moth population control, possibly also for devising methods for reducing the extent, intensity, and duration of outbreaks.
Authors
Ólöf Dóra Bartels Jónsdóttir Davíð Gíslason Guðbjörg Ólafsdóttir Simo Maduna Snorre Hagen Patrick Reynolds Sæmundur Sveinsson Albert ImslandAbstract
Lumpfish is now the single most important cleaner fish species to date and there is an extensive lumpfish translocation along the Norwegian coast. A reliable baseline information about the population genetic structure of lumpfish is a prerequisite for an optimal managing of the species to minimize possible genetic translocation and avoid possible hybridisation and introgression with local populations. The current study is a follow up of the study of Jónsdóttir et al. (2018) using expressed sequence tag-short tandem repeats (EST-STRs) markers. Samples (N = 291) were analysed from six sample locations along the Norwegian coastline from south to north, with additional 18 samples of first-generation (from wild fish) reared fish from a fish farm outside Tromsø (North Norway). Present findings show a lack of population differentiation among lumpfish sampling population along the Norwegian coast using EST-STRs, which is in accordance with the findings of Jónsdóttir et al. (2018) where genomic STRs (g-STRs) were analysed. Present findings indicate that should translocated lumpfish escape from salmon sea pens in Norway, this will probably have little impact on the genetic composition of the local lumpfish population.
Abstract
No abstract has been registered
Authors
Paul Eric Aspholm Juho Vuolteenaho Hallvard Jensen Cornelya Klutsch Helena Klöckener Snorre HagenAbstract
No abstract has been registered
Authors
Mari Røken Kristin Forfang Yngvild Wasteson Anita Haug Haaland Hans Geir Eiken Snorre Hagen Ane Mohn BjellandAbstract
Aims To investigate and compare antimicrobial resistance genes (ARGs) in faeces from cohabiting dogs and owners. Methods and Results DNA from faecal samples from 35 dogs and 35 owners was screened for the presence of 34 clinically relevant ARGs using high throughput qPCR. In total, 24 and 25 different ARGs were present in the dog and owner groups, respectively. The households had a mean of 9.9 ARGs present, with dogs and owners sharing on average 3.3 ARGs. ARGs were shared significantly more in households with dogs over 6 years old (3.5, interquartile range 2.75–5.0) than in households with younger dogs (2.5, interquartile range 2.0–3.0) (p = 0.02). Dogs possessed significantly more mecA and aminoglycoside resistance genes than owners. Conclusions Dogs and owners can act as reservoirs for a broad range of ARGs belonging to several antimicrobial resistance classes. A modest proportion of the same resistance genes were present in both dogs and owners simultaneously, indicating that ARG transmission between the dog and human gut is of minor concern in the absence of antimicrobial selection. Significance and Impact of the Study This study provides insight into the common dog and human gut resistomes, contributing to an improved knowledge base in risk assessments regarding ARG transmission between dogs and humans.