Jakob Geipel
Research Scientist
Biography
I am a researcher and expert for utilizing unmanned aerial vehicles (UAV) and unmanned ground vehicles (UGV) for sensor measurements in agriculture. I focus amongst others on hyperspectral remote sensing, photogrammetry, image processing, geo-information, programming, prototyping, and multivariate statistics. My field of research comprises both grain and forage production.
CV
Competences:
Multi- and hyperspectral remote sensing in agriculture, UAV, UGV, GNSS, GIS, sensor web, mapping, 3D modelling, multivariate and geo-statistics, programming, prototyping
Education:
2012-2016: Dr. sc. agr. (Ph.D.) in Agricultural Sciences at the Institute of Crop Science, Department of Agronomy, University of Hohenheim, Germany
2009-2012: M.Sc. in Geoinformatics at the Institute for Geoinformatics, University of Münster, Germany
2005-2009: Dipl.-Ing. (FH) in Surveying Engineering and Geoinformatics at the University of Applied Sciences Würzburg-Schweinfurt, Germany
Abstract
The ageing population, climate change, and labour shortages in the agricultural sector are driving the need to reevaluate current farming practices. To address these challenges, the deployment of robot systems can help reduce environmental footprints and increase productivity. However, convincing farmers to adopt new technologies poses difficulties, considering economic viability and ease of use. In this paper, we introduce a management system based on the Robot Operating System (ROS) that integrates heterogeneous vehicles (conventional tractors and mobile robots). The goal of the proposed work is to ease the adoption of mobile robots in an agricultural context by providing to the farmer the initial tools needed to include them alongside the conventional machinery. We provide a comprehensive overview of the system’s architecture, the control laws implemented for fleet navigation within the field, the development of a user-friendly Graphical User Interface, and the charging infrastructure for the deployed vehicles. Additionally, field tests are conducted to demonstrate the effectiveness of the proposed framework.
Abstract
A process-based model was developed to predict dry matter yields and amounts of harvested nitrogen in conventionally cropped grassland fields, accounting for within-field variation by a node network design and utilizing remotely sensed information from a drone-borne system for increased accuracy. The model, named NORNE, was kept as simple as possible regarding required input variables, but with sufficient complexity to handle central processes and minimize prediction errors. The inputs comprised weather data, soil information, management data related to fertilization, and a visual estimate of clover proportion in the aboveground biomass. A sensitivity analysis was included to apportioning variation in dry matter yield outputs to variation in model parameter settings. Using default parameter values from the literature, the model was evaluated on data from a two-year study (2016–2017, 264 research plots in total each year) conducted at two locations in Norway (i.e. in South-East and in Central Norway) with contrasting climatic conditions and with internal variation in soil characteristics. The results showed that the model could estimate dry matter yields with a relatively high accuracy without any corrections based on remote sensing, compared with published results from comparable model studies. To further improve the results, the model was calibrated shortly before harvest, using predictions of above ground dry matter biomass obtained from a drone-borne remote sensing system. The only parameters which were hereby adjusted in the NORNE model were the starting values of nitrogen content in soil (first cut) and the plant available water capacity (second cut). The calibration based on the remotely sensed information improved the predictive performance of the model significantly. At first cut, the root mean square error (RMSE) of dry matter yield prediction was reduced by 20% to a mean value of 58 g m−2, corresponding to a relative value (rRMSE) of 0.12. For the second cut, the RMSE decreased by 13% to 66 g m−2 (rRMSE: 0.18). The model was also evaluated in terms of the predictions of amounts of nitrogen in the harvested crop. Here, the calibration reduced the RMSE of the first cut by 38%, obtaining a mean RMSE value of 2.1 g N m−2 (rRMSE: 0.28). For the second cut, the RMSE reduction for simulated harvested N was 16%, corresponding to a mean RMSE value of 2.3 g N m−2 (rRMSE: 0.33). The large improvements in model accuracy for simulated dry matter and nitrogen yields obtained through calibration by utilizing remotely sensed information, indicate the importance of considering spatial variability when applying models under Nordic conditions, both for yield predictions and for decision support for nitrogen application.
Abstract
Weeds affect crop yield and quality due to competition for resources. In order to reduce the risk of yield losses due to weeds, herbicides or non-chemical measures are applied. Weeds, especially creeping perennial species, are generally distributed in patches within arable fields. Hence, instead of applying control measures uniformly, precision weeding or site-specific weed management (SSWM) is highly recommended. Unmanned aerial vehicle (UAV) imaging is known for wide area coverage and flexible operation frequency, making it a potential solution to generate weed maps at a reasonable cost. Efficient weed mapping algorithms need to be developed together with UAV imagery to facilitate SSWM. Different machine learning (ML) approaches have been developed for image-based weed mapping, either classical ML models or the more up-to-date deep learning (DL) models taking full advantage of parallel computation on a GPU (graphics processing unit). Attention-based transformer DL models, which have seen a recent boom, are expected to overtake classical convolutional neural network (CNN) DL models. This inspired us to develop a transformer DL model for segmenting weeds, cereal crops, and ‘other’ in low-resolution RGB UAV imagery (about 33 mm ground sampling distance, g.s.d.) captured after the cereal crop had turned yellow. Images were acquired during three years in 15 fields with three cereal species (Triticum aestivum, Hordeum vulgare, and Avena sativa) and various weed flora dominated by creeping perennials (mainly Cirsium arvense and Elymus repens). The performance of our transformer model, 1Dtransformer, was evaluated through comparison with a classical DL model, 1DCNN, and two classical ML methods, i.e., random forest (RF) and k-nearest neighbor (KNN). The transformer model showed the best performance with an overall accuracy of 98.694% on pixels set aside for validation. It also agreed best and relatively well with ground reference data on total weed coverage, R2 = 0.598. In this study, we showed the outstanding performance and robustness of a 1Dtransformer model for weed mapping based on UAV imagery for the first time. The model can be used to obtain weed maps in cereals fields known to be infested by perennial weeds. These maps can be used as basis for the generation of prescription maps for SSWM, either pre-harvest, post-harvest, or in the next crop, by applying herbicides or non-chemical measures.
