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Publications

NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.

2022

Abstract

We determined the mitogenome of Cyclopterus lumpus using a hybrid sequencing approach, and another four closely related species in the Liparidae based on available next-generation sequence data. We found that the mitogenome of C. lumpus was 17,266 bp in length, where the length and organisation were comparable to those reported for cottoids. However, we found a GC-homopolymer region in the intergenic space between tRNALeu2 and ND1 in liparids and cyclopterids. Phylogenetic reconstruction confirmed the monophyly of infraorders and firmly supported a sister-group relationship between Cyclopteridae and Liparidae. Purifying selection was the predominant force in the evolution of cottoid mitogenomes. There was significant evidence of relaxed selective pressures along the lineage of deep-sea fish, while selection was intensified in the freshwater lineage. Overall, our analysis provides a necessary expansion in the availability of mitogenomic sequences and sheds light on mitogenomic adaptation in Cottoidei fish inhabiting different aquatic environments.

Abstract

In a fertiliser experiment in a Norway spruce forest in SE Norway, four treatments were applied in a block design with three replicates per treatment. Treatments included 3 t wood ash ha−1 (Ash), 150 kg nitrogen ha−1 (N), wood ash and nitrogen combined (Ash + N), and unfertilised control (Ctrl). Treatment effects on understory plant species numbers, single abundances of species and (summarised) cover of main species groups were studied. Two years after treatment there were no significant changes for species numbers or abundances of woody species, dwarf shrubs or pteridophytes, nor for Sphagnum spp. in the bottom layer. The cover of graminoids decreased in Ctrl plots. Herb cover increased significantly in Ash + N and N plots due to the increase of Melampyrum sylvaticum. In Ash + N plots, mosses decreased significantly in species number, while their cover increased. Moss cover also decreased significantly in N plots. The species number and cover of hepatics decreased significantly in Ash and Ash + N plots. Hepatics cover also decreased in Ctrl plots. Both the lichen number and cover decreased in Ash + N plots. Single species abundances decreased for many bryophytes in fertilised plots. To conclude, fertilisation had modest effects on vascular plants, while bryophytes were more strongly affected, especially by Ash + N.

Abstract

Soil disinfestation by steaming is being reconsidered for its efficiency in controlling or even eradicating pathogens, nematodes and weed seeds, particularly to avoid excess use of pesticides. Most weeds within a field result from seeds in the soil seedbank and therefore management of weed seeds in the soil seedbank offers practical long-term management of weeds, especially those difficult to control. We investigated the possibility of thermal control of seeds of grass weeds Bromus sterilis (barren brome) and Echinochloa crus-galli (barnyardgrass) using a prototype of a soil steaming device. Five different soil temperatures of 60, 70, 80, 90 and 99°C with an exposure duration of 3 min were tested. Four replications of 50 seeds of each species were placed in polypropylene-fleece bags. Bags in the same replicate of each target temperature were placed at the bottom of one plastic perforated basket container and covered by a 7-cm soil layer. Each basket was placed in the steaming container and steam was released from the top and vacuumed from the bottom of the container. Soil temperature was monitored by 10 thermocouples and steaming was stopped when 5 of the thermocouples had reached the target temperature. The basket was then removed from the steaming container after 3 min exposure time. Bags were taken out, opened, placed on soil surface in pots and covered by a thin layer of soil. Seed germination was followed for 8 weeks in the greenhouse. Non-steamed seeds were used as controls. It was shown that soil temperatures of 60, 70, 80, 90 and 99°C lasting for 3 min reduced the seed germination of barren brome by 83, 100, 100, 95 and 100% and seed germination of barnyardgrass by 74, 69, 83, 89 and 100% respectively, compared to the controls. Germination rate of control seeds were 94 and 71% for barren brome and barnyardgrass, respectively. These results show a promising seed mortality level of these two weed species by steaming and that steam is a potential method to control weed seeds, however further studies are needed to investigate the effect of other factors such as soil type and moisture content. Keywords: Non-chemical weed control, thermal soil disinfection, weed seedbank

Abstract

Invasive plant propagative material can be introduced to new regions as contaminants in soil. Therefore, moving soil should be done only when the soil has been verified to be free of invasive species. Stationary soil steaming as a non-chemical control method has the potential to disinfect soil masses contaminated with invasive species. We investigated the possibility of thermal control of propagative material of Bohemian knotweed (Reynoutria × bohemica) in two experiments using a prototype of a soil steaming device. Five soil temperatures of 60, 70, 80, 90 and 99 °C with an exposure duration of 3 min were tested. In each replicate and target temperature, rhizome cuttings containing at least two buds and shoot clumps were placed at the bottom of a plastic perforated basket and covered by a 7-cm soil layer. Each basket was placed in the steaming container and steam was released from the top and vacuumed from the bottom. Soil temperature was monitored by 10 thermocouples and steaming was stopped when 5 of the thermocouples had reached the target temperature. The basket was then removed from the steaming container after 3 min. Plant materials were taken out and planted in pots. Buds sprouting was followed for 8 weeks. Non-steamed plant materials were used as controls. Results showed 100% rhizome death at soil temperatures of ≥70 and 99 °C in the first and second experiments, respectively. Shoot clumps death was obtained at ≥90 °C in both experiments. These results showed that steaming at 99 °C for 3 min can guarantee control of Bohemian knotweed in infested soils supporting the steam treatment as a potential method of disinfecting soil against invasive species. However, depending on the intended re-use of the soil, further studies are needed on the effect of potential negative impacts of high temperatures on the soil quality.

Abstract

Reusing soil can reduce environmental impacts associated with obtaining natural fresh soil during road construction and analogous activities. However, the movement and reuse of soils can spread numerous plant diseases and pests, including propagules of weeds and invasive alien plant species. To avoid the spread of barnyardgrass in reused soil, its seeds must be killed before that soil is spread to new areas. We investigated the possibility of thermal control of barnyardgrass seeds using a prototype of a stationary soil steaming device. One Polish and four Norwegian seed populations were examined for thermal sensitivity. To mimic a natural range in seed moisture content, dried seeds were moistened for 0, 12, 24, or 48 h before steaming. To find effective soil temperatures and whether exposure duration is important, we tested target soil temperatures in the range 60 to 99 C at an exposure duration of 90 s (Experiment 1) and exposure durations of 30, 90, or 180 s with a target temperature of 99 C (Experiment 2). In a third experiment, we tested exposure durations of 90, 180, and 540 s at 99 C (Experiment 3). Obtaining target temperatures was challenging. For target temperatures of 60, 70, 80, and 99 C, the actual temperatures obtained were 59 to 69, 74 to 76, 77 to 83, and 94 to 99 C, respectively. After steaming treatments, seed germination was followed for 28 d in a greenhouse. Maximum soil temperature affected seed germination, but exposure duration did not. Seed premoistening was of influence but varied among temperatures and populations. The relationships between maximum soil temperature and seed germination were described by a common dose–response function. Seed germination was reduced by 50% when the maximum soil temperature reached 62 to 68 C and 90% at 76 to 86 C. For total weed control, 94 C was required in four populations, whereas 79 C was sufficient in one Norwegian population.

Abstract

Established invasive alien plant species make it difficult and costly to move and make use of infested soil in public and private construction work. Stationary soil steaming as a non-chemical control method has the potential to disinfect soil masses contaminated with seeds and other propagative plant materials. The outcome can vary depending on steaming temperature and duration. Higher temperatures and longer durations are relatively more efficient but may also have side-effects including change in soil physical and chemical characteristics. Barnyard grass (Echinochloa crus-galli) is among troublesome invasive species in Norway. We have tested different steam duration at 99°C to find the possible lowest effective exposure duration for killing seeds of this annual grass species. Four replications of 40 barnyard grass dry seeds of one population were placed in polypropylene-fleece bags (9*7 cm), moistened for 12 hours, and covered by the soil at a depth of 7 cm in 60*40*20 cm boxes. The boxes with soil and bags were steamed at 99°C for 1.5, 3 and 9 min. The bags including steamed seeds were taken out, opened, placed on soil surface in pots and covered by a thin layer of soil. The pots were placed in greenhouse and watered from below and seed germination was followed for a month. Moistened non-steamed seeds were used as control. It was shown that steaming at 99°C gave 0% germination indicating that 100% of the seeds were killed regardless of exposure duration while in the control seed germination was 100%. Consequently, to achieve an efficacy of 100%, exposure duration of 1.5 min would be enough. Finding the lowest possible steam temperature and exposure duration to get the highest possible seed killing in a seed mixture of different plant species as well as other factors to increase the heat transferability are under investigation. Keywords: Echinochloa crus-galli; Resource recovery; Steaming temperature and duration; Thermal soil disinfection

2021