Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2023
Authors
Juliana D. Klein Simo Maduna Matthew L. Dicken Charlene Da Silva Michelle Soekoe Meaghen E. McCord Warren M. Potts Snorre Hagen Aletta E Bester-van der MerweAbstract
Adaptive divergence in response to environmental clines are expected to be common in species occupying heterogeneous environments. Despite numerous advances in techniques appropriate for non-model species, gene–environment association studies in elasmobranchs are still scarce. The bronze whaler or copper shark (Carcharhinus brachyurus) is a large coastal shark with a wide distribution and one of the most exploited elasmobranchs in southern Africa. Here, we assessed the distribution of neutral and adaptive genomic diversity in C. brachyurus across a highly heterogeneous environment in southern Africa based on genome-wide SNPs obtained through a restriction site-associated DNA method (3RAD). A combination of differentiation-based genome-scan (outflank) and genotype–environment analyses (redundancy analysis, latent factor mixed models) identified a total of 234 differentiation-based outlier and candidate SNPs associated with bioclimatic variables. Analysis of 26,299 putatively neutral SNPs revealed moderate and evenly distributed levels of genomic diversity across sites from the east coast of South Africa to Angola. Multivariate and clustering analyses demonstrated a high degree of gene flow with no significant population structuring among or within ocean basins. In contrast, the putatively adaptive SNPs demonstrated the presence of two clusters and deep divergence between Angola and all other individuals from Namibia and South Africa. These results provide evidence for adaptive divergence in response to a heterogeneous seascape in a large, mobile shark despite high levels of gene flow. These results are expected to inform management strategies and policy at the national and regional level for conservation of C. brachyurus populations.
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Authors
Jyrki Jauhiainen Juha Heikkinen Nicholas Clarke Hongxing He Lise Dalsgaard Kari Minkkinen Paavo Ojanen Lars Vesterdal Jukka Alm Aldis Butlers Ingeborg Callesen Sabine Jordan Annalea Lohila Ülo Mander Hlynur Óskarsson Bjarni D. Sigurdsson Gunnhild Søgaard Kaido Soosaar Åsa Kasimir Brynhildur Bjarnadóttir Andis Lazdins Raija LaihoAbstract
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This paper explores the utilisation of gauge rainfall and satellite-based precipitation product (SPP)-TRMM3B42, to develop IDF curves for the Fiji Islands. The study compares the application of remote sensing data against rain gauge (RG) data for two main stations, Nadi and Nausori (1991 to 2020). The accuracy of SPPs is evaluated through statistical analysis, employing continuous and categorical evaluation indices. The results indicate that TRMM3B42 tends to overestimate light precipitation and underestimate heavy rainfall in low elevations when compared to rain gauge data. Rainfall intensities derived from satellite data exhibit relative changes within ± 10%. This study also performs future projections. Two greenhouse emission scenarios, Shared Socioeconomic Pathways (SSP) 2–4.5 and 5–8.5, are employed for IDF curve projection. The analysis reveals that changes in IDF curves are more pronounced for short-duration rainfall as compared to high-duration rainfall. Additionally, higher emission scenarios demonstrate greater changes compared to lower scenarios. These findings emphasise the importance of accounting for climate change and future projections in designing urban infrastructure, particularly considering potential urban expansion and human settlements. This study helps in solving design problems associated with urban runoff control and disposal where knowing the rainfall intensities of different return periods with different durations is vital.
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Trygve S. AamlidAbstract
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