Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2023
Authors
Laura Elina JaakolaAbstract
Phenolic compounds constitute one of the most important groups of the bioactive molecules in food plants. These compounds have received attention for their beneficial properties for human health and they also are involved in diverse important roles in plants, including signaling and defense against biotic and abiotic stress factors. Vaccinium berries are one of the richest sources of phenolic compounds of which flavonoid classes of anthocyanins, proanthocyanidins, flavonols in addition to hydroxycinnamic acids are the main phenolics in these species. Besides in berries, phenolic compounds are also present in other parts of the plant. Biosynthesis of flavonoids via the phenylpropanoid pathway is well understood and the key enzymes leading to different intermediates or different flavonoid classes have been characterized in many species including wild and cultivated Vaccinium species. At the molecular level, the biosynthesis is regulated via co-ordinated transcriptional control of the enzymes in the pathway by the interaction with transcription factors of the MYB-bHLH-WD40 (MBW) complex. Upstream regulators of the pathway have also been identified. The biosynthesis is controlled both at the level as well as by the surrounding environmental factors. Plant hormones are the key players in the development and the ripening process of the fruits. Especially abscisic acid (ABA) and methyl jasmonate (MeJA) have been shown to have a key role in the flavonoid metabolism of Vaccinium species. Accumulation of transcriptome, genome and metabolome data are currently increasing our understanding on the complicated regulation networks controlling the metabolism of the phenolic compounds in the Vaccinium species. This offers new tools for selection of the species and cultivars with preferred characteristics, for instance berries with higher health benefit potential or plants with better stress resistance.
Authors
Jian LiuAbstract
No abstract has been registered
Authors
Dario Isidro Ojeda Alayon Max John Robert L. Hammond Riitta Savolainen Kari Vepsäläinen Torstein KvammeAbstract
The Formicoxenus genus-group comprises six genera within the tribe Crematogastrini. The group is well known for repeated evolution of social parasitism among closely related taxa and cold-adapted species with large distribution ranges in the Nearctic and Palearctic regions. Previous analyses based on nuclear markers (ultraconserved elements, UCEs) and mitochondrial genes suggest close relationship between Formicoxenus Mayr, 1855, Leptothorax Mayr, 1855 and Harpagoxenus Forel, 1893. However, scant sampling has limited phylogenetic assessment of these genera. Also, previous phylogeographic analyses of L. acervorum (Fabricius, 1793) have been limited to its West-Palearctic range of distribution, which has provided a narrow view on recolonization, population structure and existing refugia of the species. Here, we inferred the phylogenenetic history of genera within the Formicoxenus genus-group and reconstructed the phylogeography of L. acervorum with more extensive sampling. We employed three datasets, one data set consisting of whole mitochondrial genomes, and two data sets of sequences of the COI-5P (658 bp) with different number of specimens. The topologies of previous nuclear and our inferences based on mitochondrial genomes were overall congruent. Further, Formicoxenus may not be monophyletic. We found several monophyletic lineages that do not correspond to the current species described within Leptothorax, especially in the Nearctic region. We identified a monophyletic L. acervorum lineage that comprises both Nearctic and Palearctic locations. The most recent expansion within L. acervorum probably occurred within the last 0.5 Ma with isolated populations predating the Last Glacial Maximum (LGM), which are localized in at least two refugial areas (Pyrenean and Northern plateau) in the Iberian Peninsula. The patterns recovered suggest a shared glacial refugium in the Iberian Peninsula with cold-adapted trees that currently share high-altitude environments in this region.
Authors
Arne Stensvand Natalia A. Peres David M. Gadoury Belachew Asalf Tadesse Aruppillai SuthaparanAbstract
No abstract has been registered
Abstract
The efficacy of currently available fungicides against apple scab, caused by the fungal pathogen Venturia inaequalis, was investigated in relation to when growers spray (ahead, during, or after rain) and how the spray reaches the target. The adaxial surface of individual leaves of potted trees were sprayed and then inoculated with ascospores of V. inaequalis, to establish dose-response curves for each fungicide. Discriminatory doses providing 50 and 90% symptom inhibition (EC50 and EC90, respectively) in sprays mimicking applications ahead of rain were used for experiments imitating alternative spray timings. Sprays were either applied during the spore germination phase or early or late after infection onset (either 336 or 672 degree-hours after inoculation, respectively), corresponding to grower spray schedules. Experiments were also carried out with sprays applied on the abaxial leaf surface to investigate fungicide efficacy through the leaf lamina. For all fungicides, the best efficacy was observed when sprays were applied during germination, followed by applications ahead of inoculation. Some products maintained equal or better efficacy at early infection, while efficacy in late infection dropped for all products, clearly indicating that this spray timing should be avoided. Some products with postinfection efficacy also showed translaminar efficacy. The close relationship found between EC50 of the active ingredients on potted trees and the label rate could help improve spraying decisions and reduce costs.
Authors
Paul Eric Aspholm Simo Maduna Juho Vuolteenaho Cornelya Klutsch Hallvard Jensen Ida Marie Bardalen Fløystad Ingrid Helle Søvik Ane-Sofie Bednarczyk Hansen Josefine Bergs Benedicte Beddari Helena Klöckener Snorre HagenAbstract
No abstract has been registered
Authors
Melissa MagerøyAbstract
Epigenetic modification is an important mechanism that allows plants to rapidly adapt to changes in environment. This modification can provide long-term increased tolerance and resistance to abiotic and biotic stress and may even be transmittable to progeny. Knowledge on how epigenetic memory is established, maintained, triggered, and transmitted in plants with different evolutionary and life histories is important for understanding and utilizing epigenetic adaptation in plant protection. In this symposium, we welcome talks from those that provide insight into the molecular mechanism underlying epigenetic memory to those that present the practical aspects of implementing epigenetic adaptation in the field.
Authors
M.L. Robinson P.G. Hahn B.D. Inouye N. Underwood S.R. Whitehead K.C. Abbott E.M. Bruna N.I. Cacho L.A. Dyer L. Abdala-Roberts W.J. Allen J.F. Andrade D.F. Angulo D. Anjos D.N. Anstett R. Bagchi S. Bagchi M. Barbosa S. Barrett C.A. Baskett E. Ben-Simchon K.J. Bloodworth J.L. Bronstein Y.M. Buckley K.T. Burghardt C. Bustos-Segura E.S. Calixto R.L. Carvalho B. Castagneyrol M.C. Chiuffo D. Cinoğlu E. Cinto Mejía M.C. Cock R. Cogni O.L. Cope T. Cornelissen D.R. Cortez D.W. Crowder C. Dallstream W. Dáttilo J.K. Davis R.D. Dimarco H.E. Dole I.N. Egbon M. Eisenring A. Ejomah B.D. Elderd Joshua Lynn Anne Muola Vigdis VandvikAbstract
Interactions between plants and herbivores are central in most ecosystems, but their strength is highly variable. The amount of variability within a system is thought to influence most aspects of plant-herbivore biology, from ecological stability to plant defense evolution. Our understanding of what influences variability, however, is limited by sparse data. We collected standardized surveys of herbivory for 503 plant species at 790 sites across 116° of latitude. With these data, we show that within-population variability in herbivory increases with latitude, decreases with plant size, and is phylogenetically structured. Differences in the magnitude of variability are thus central to how plant-herbivore biology varies across macroscale gradients. We argue that increased focus on interaction variability will advance understanding of patterns of life on Earth.
Abstract
No abstract has been registered
Authors
Hang Su Andre van Eerde Espen Rimstad Ralph Bock Norica Branza-Nichita Igor A. Yakovlev Jihong Liu ClarkeAbstract
Plants provide not only food and feed, but also herbal medicines and various raw materials for industry. Moreover, plants can be green factories producing high value bioproducts such as biopharmaceuticals and vaccines. Advantages of plant-based production platforms include easy scale-up, cost effectiveness, and high safety as plants are not hosts for human and animal pathogens. Plant cells perform many post-translational modifications that are present in humans and animals and can be essential for biological activity of produced recombinant proteins. Stimulated by progress in plant transformation technologies, substantial efforts have been made in both the public and the private sectors to develop plant-based vaccine production platforms. Recent promising examples include plant-made vaccines against COVID-19 and Ebola. The COVIFENZ® COVID-19 vaccine produced in Nicotiana benthamiana has been approved in Canada, and several plant-made influenza vaccines have undergone clinical trials. In this review, we discuss the status of vaccine production in plants and the state of the art in downstream processing according to good manufacturing practice (GMP). We discuss different production approaches, including stable transgenic plants and transient expression technologies, and review selected applications in the area of human and veterinary vaccines. We also highlight specific challenges associated with viral vaccine production for different target organisms, including lower vertebrates (e.g., farmed fish), and discuss future perspectives for the field.