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Publications

NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.

2017

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Abstract

Fire blight, caused by Erwinia amylovora, was detected for the first time in Norway in 1986. It was a limited outbreak on the south-western coast, only on ornamentals, and particularly on Cotoneaster spp. An action group handling the eradication and containment of the disease was quickly established. Comprehensive statutory powers and resources were given by the government to do surveys and eradicate diseased or symptomless but highly susceptible plant species from contaminated areas. These activities have likely restricted fire blight to the western and southern coastal areas. Eastern and northern parts of Norway are considered free from fire blight. The disease has not been observed in important fruit-growing areas. Uncontrolled movement of beehives from areas with fire blight to areas free from the disease has contributed to its introduction to new areas. From 1969 to 2016 import of most host plants of E. amylovora from countries with fire blight was prohibited. A yearly program for annual surveys in parts of the country with commercial fruit-growing and nurseries, using digital maps on internet connected tablets with GPS and software for in situ registrations, proved to be an efficient method for discovering new outbreaks at an early stage, and to start eradication and thus limit further spread.

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Abstract

The aim of this study was to evaluate the natural occurrence of Beauveria spp. in soil, from infections in the stink bug Piezodorus guildinii, an important pest of common bean (Phaseolus vulgaris) and as endophytes in bean plant tissue. Twelve conventional and 12 organic common bean fields in the Villa Clara province, Cuba were sampled from September 2014 to April 2015. One hundred and fifty Beauveria isolates were obtained from soil samples, bean plant parts and stink bugs. The overall frequency of occurrence of Beauveria isolates in conventional fields (8.4%) was significantly lower than that in organic fields (23.6%). Beauveria were also obtained significantly more frequently from bean roots in organic fields (15.0%) compared to bean roots in conventional fields (3.3%). DNA sequencing of the intergenic Bloc region was performed for Beauveria species identification. All isolates where characterized as Beauveria bassiana (Balsamo-Crivelli) Vuillemin, and clustered with isolates of neotropical origin previously described as AFNEO_1. The Cuban B. bassiana isolates formed five clusters in the phylogeny. Isolates of two clusters originated from all four locations, organic and conventional fields, as well as soil, plants and stink bugs. Organic fields contained isolates of all five clusters while conventional fields only harbored isolates of the two most frequent ones. Mating type PCR assays revealed that mating type distribution was skewed, with MAT1/MAT2 proportion of 146/4, indicating limited potential for recombination. The present study is the first to report of B. bassiana as a naturally occurring endophyte in common bean. Further, it shows that B. bassiana occurs naturally in diverse environments of common bean fields, and constitutes a potential reservoir of natural enemies against pest insects particularly in organic fields.

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Abstract

We propose a theoretical framework for the relationship between animal welfare and the economic performance of livestock farms. We empirically analyse this relationship based on a unique dataset of randomly sampled Danish pig herds that includes information from unannounced inspections of the compliance with the animal welfare legislation. We find large variations in economic performance and animal welfare. The relationship between these two indicators is rather weak, but tends to be slightly positive. A possible explanation for our results is that management has a major influence on both economic performance and animal welfare so that good farm managers are able to meet all animal welfare regulations, while achieving a high economic performance.

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Abstract

In-depth metabolic profiling, also termed metabolomics, provides detailed information about the biochemical phenotype of an organism. Besides improving our understanding of biochemical processes, metabolomics is used for environmental monitoring, natural product discovery, or even chemotaxonomy, among others. However, for marine macroalgae, comparative large-scale metabolomics studies are lacking, even though seaweeds belong to the most important aquatic primary producers. In this study, we present via a broad scale systematic metabolomics survey 391 metabolites from 21 seaweeds species, representing brown, red and green algae. We demonstrate clear differences in metabolite composition of these seaweeds, reflecting their taxonomic classification. We highlight these differences for amino acid, amino acid derivative and peptide metabolites, energy and carbohydrate metabolites, for lipid, fatty acid and sterol metabolites and for secondary metabolites, including selected metabolic pathways such as the urea cycle, the citrate cycle and the glyconeogenesis/glycolysis, besides others. Additionally, we link selected seaweed biochemical properties to potential pharmaceutical and nutraceutical applications.

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Abstract

The extractive content of inner and outer heartwood of nine Scots pine trees from three different stands in Norway was determined by automated solvent extraction and biological screening tests were performed using basidiomycetes. The evaluation of mass spectra by means of a NIST library search shows that in the petroleum ether extracts α-pinene and carene as well as terpinene and cadinene derivatives are the main extractives found in both inner and outer heartwood. In the inner heartwood, however, these substance groups were found in lower quantities. These substances mainly have a hydrophobic effect. The screening tests indicate that also extractive-rich heartwood is extremely degraded by Poria placenta which corresponds to the analytical results of the petroleum ether extracts.

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Abstract

Chronic Hepatitis B Virus (HBV) infection leads to severe liver pathogenesis associated with significant morbidity and mortality. As no curable medication is yet available, vaccination remains the most costeffective approach to limit HBV spreading and control the infection. Although safe and efficient, the standard vaccine based on production of the small (S) envelope protein in yeast fails to elicit an effective immune response in about 10% of vaccinated individuals, which are at risk of infection. One strategy to address this issue is the development of more immunogenic antigens. Here we describe a novel HBV antigen obtained by combining relevant immunogenic determinants of S and large (L) envelope proteins. Our approach was based on the insertion of residues 21-47 of the preS1 domain of the L protein (nomenclature according to genotype D), involved in virus attachment to hepatocytes, within the external antigenic loop of S. The resulting S/preS121-47 chimera was successfully produced in HEK293T and Nicotiana benthamiana plants, as a more economical recombinant protein production platform. Comparative biochemical, functional and electron microscopy analysis indicated assembly of the novel antigen into subviral particles in mammalian and plant cells. Importantly, these particles preserve both S- and preS1-specific epitopes and elicit significantly stronger humoral and cellular immune responses than the S protein, in both expression systems used. Our data promote this antigen as a promising vaccine candidate to overcome poor responsiveness to the conventional, S protein-based, HBV vaccine.