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Publications

NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.

2005

Abstract

The joint network of tree crown condition monitoring under the EU and ICP Forests operates at two levels, a systematic extensive approach (Level I) based on a 16 km x 16 km trans-national grid of sample plots (>6000 plots) and an intensive approach (Level II) on more than 800 plots across continental Europe. Three ongoing projects embrace the different levels of monitoring, the above mentioned Level I and Level II systems, and the National Forest Inventories (NFIs). All of the three projects are based on a stand structure approach that assumes an increased potential for species diversity with increasing complexity of stand structure. An intensive test-phase of forest biodiversity assessment at more than 100 Level II plots, known as ForestBIOTA is underway during 2005. This project aims to test standardized methods of forest biodiversity assessment in the field and examine the relationship between stand structure, forest deadwood, ground vegetation and epiphytic lichens. A forest classification of the plots is also included. A separate approach, known as BioSoil (due to its combination with a detailed chemical inventory of the soils) is a demonstration project which aims to record indicators of forest biodiversity at the extensive Level I plots. Practical measures of stand structure, including records of tree species, lists of vascular plant species, and simple measures of forest deadwood are included for field assessment during 2006. A pan-European forest type classification elaborating on the EUNIS system and including the Natura 2000 habitat types is proposed. These initiatives are linked to a third project, COMON, operating at the level of the National Forest Inventories aiming to test the same core variables at national levels.

Abstract

Intensive monitoring plots of the ICP Forests gathered an amount of data about the ground vegetation in forest ecosystems throughout Europe. Each Country, applying different field techniques, conform to common rules of procedure, under the suggestions of a dedicated Expert Panel which implemented a Unified Coded Flora and comparability targets. Data series are foreseen to contribute to: definition of the forest ecosystem state and changes evaluation; assessment of the specific plant diversity at the ecosystems level. The contribution to scientific knowledge and to Global and Pan-European biodiversity initiatives and networks (ICP-IM, MCPFE, CBD, Forest BIOTA, ALTER-net, etc.) are also underlined. In spite of site-related data, first results (more than 670 plots, with large differences in plant diversity) depict the linkages with temperature, precipitation, dominant tree species and actual soil acidity. Nitrogen deposition seems to have some significant influence, which claims to further studies. Plant data series from ICP Forest’s plot, can be used for on-site confirmation of models including biodiversity k-factors and environment relations.

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Abstract

In field experiments, clones of Norway spruce [Picea abies (L.) Karst.] showed different degrees of resistance against pathogenic fungi inoculated into the bark that correlate with differences in polyphenolic parenchyma (PP) cells of the bark. Cells of spruce callus cultures, particularly towards the callus surface, resemble PP cells and this study looks at changes in callus cells during infection and the relative resistance of cultures from clones of low (weak) or high (strong) resistance to fungal infection. Callus cultures, initiated from trees with different resistance, were co-inoculated with Ceratocystis polonica (Siem.) C. Moreau and Heterobasidion annosum (Fr.) Bref. Callus cells from strong clones resemble PP cells of bark tissue from strong clones, having more polyphenolic bodies, while callus cells from weak clones are more similar to PP cells from those clones, which have less extensive phenolic bodies. Callus cultures from trees with weak resistance were more quickly overgrown by both species of pathogenic fungi than cultures from trees with strong resistance. Callus cells of infected cultures showed changes similar to activated PP cells of bark, including enhanced accumulation of polyphenolics. Phenolic bodies were more numerous and more extensive (larger and denser) in callus cells of strong versus weak clones under all conditions. Thus, callus cells may perform similar functions in defense as PP cells in the bark. Callus from trees of varying resistance seem to reflect the relative resistance of the trees from which they are derived, and this study indicates that some mechanisms of resistance can be studied using callus from trees of different resistance.

Abstract

*Strawberry Fragaria × ananassa (cv. Korona) was inoculated with Botrytis cinerea by dipping berries in a conidial suspension. *Colonization by the pathogen was monitored using real-time PCR, ELISA and ergosterol assays, the first showing the highest sensitivity. The expression of pathogen B-tubulin and six polygalacturonases (Bcpg1-6) and three host defence genes (polygalacturonase-inhibiting protein (FaPGIP) and two class II chitinases) were monitored using real-time RT-PCR. *The maximum transcript levels of the host defence genes occurred at 16 h postinoculation (hpi) at the presumed initial penetration stage. The unique transcript profile of Bcpg2 over the 96-h incubation time and its high transcript levels relative to those of the other Bcpgs at 8-24 hpi suggest that the gene has a specific role in the penetration stage. *Bcpg1 was expressed constitutively at a relatively high level in actively growing mycelia throughout the experimental period. Comparison of the transcript profiles indicated that Bcpg1 and Bcpg3-6 were coordinately regulated.

Abstract

Ips typographus is considered the most destructive of the bark beetles in the coniferous forests of the Palaearctic region. At low population densities this species breeds in fresh windfalls or dying trees of Norway spruce. At high densities, in contrast, the beetles may show tree-killing outbreaks at regional scales. Spatio-temporal analyses based on pheromone trap data indicated that large windfall events may be a major instigator and synchronizer of beetle outbreaks in areas subjected to regionalized weather systems. The general dominance of lag 1 density dependence of the time series indicated that the beetle populations are constrained by intraspecific competition for breeding substrates. The time series sequence before the large windfelling of 1987 was however declining without significant density dependence. We suggest this to be a transition period, reflecting a drop in carrying capacity due to depletion of susceptible trees during the preceding outbreak period (1970s) and a drop in beetle number to below the density required to kill trees. A variety of organisms exhibit episodes of explosive population growth, triggered by disturbance events. A new general model is constructed to capture the coupling of disturbance events with resource accumulation / depletion. The model is refined and parameterized using the dynamics of the Ips typographus in Scandinavia as a model system. The waiting times between outbreaks of simulated time series were generally longer and more variable than the outbreak lengths, which agree well with the historical records in the last 250 years. Spectral analysis and logspline density plots of waiting times suggest that the transition from aperiodic to periodic population dynamics should be regarded as a continuum.