Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2023
Authors
Ralf Rautenberger Alexandre Detain Kari Skjånes Peter Simon Claus Schulze Viswanath Kiron Daniela Morales SanchezAbstract
Chlorella vulgaris is a freshwater microalga that synthesises large amounts of saturated lipids, which makes it suitable for production of bioenergy and biofuels. Since its cultivation usually requires freshwater, it competes with agriculture, economic development and ecological conservation for this limited natural resource. This study investigated the possibility of the partial replacement of freshwater by seawater (50 %) in the growth medium for a more sustainable biomass and lipid production. Chlorella vulgaris 211-11b was cultivated as shake-flask cultures in Bold's Basal Medium (BBM) formulated with 50 % freshwater and 50 % seawater under photoautotrophic, mixotrophic and heterotrophic conditions for eight days with glucose as organic carbon source in the latter two cases. The alga's best growth performance and highest lipid contents (49 % DW−1), dominated by palmitioleic and oleic acid, occurred under mixotrophic rather than photoautotrophic and heterotrophic conditions. This study demonstrates a more economic and ecologically sustainable biomass and lipid production of C. vulgaris by saving 50 % freshwater, which is available for other purposes.
Authors
Dario Isidro Ojeda Alayon Max John Robert L. Hammond Riitta Savolainen Kari Vepsäläinen Torstein KvammeAbstract
The Formicoxenus genus-group comprises six genera within the tribe Crematogastrini. The group is well known for repeated evolution of social parasitism among closely related taxa and cold-adapted species with large distribution ranges in the Nearctic and Palearctic regions. Previous analyses based on nuclear markers (ultraconserved elements, UCEs) and mitochondrial genes suggest close relationship between Formicoxenus Mayr, 1855, Leptothorax Mayr, 1855 and Harpagoxenus Forel, 1893. However, scant sampling has limited phylogenetic assessment of these genera. Also, previous phylogeographic analyses of L. acervorum (Fabricius, 1793) have been limited to its West-Palearctic range of distribution, which has provided a narrow view on recolonization, population structure and existing refugia of the species. Here, we inferred the phylogenenetic history of genera within the Formicoxenus genus-group and reconstructed the phylogeography of L. acervorum with more extensive sampling. We employed three datasets, one data set consisting of whole mitochondrial genomes, and two data sets of sequences of the COI-5P (658 bp) with different number of specimens. The topologies of previous nuclear and our inferences based on mitochondrial genomes were overall congruent. Further, Formicoxenus may not be monophyletic. We found several monophyletic lineages that do not correspond to the current species described within Leptothorax, especially in the Nearctic region. We identified a monophyletic L. acervorum lineage that comprises both Nearctic and Palearctic locations. The most recent expansion within L. acervorum probably occurred within the last 0.5 Ma with isolated populations predating the Last Glacial Maximum (LGM), which are localized in at least two refugial areas (Pyrenean and Northern plateau) in the Iberian Peninsula. The patterns recovered suggest a shared glacial refugium in the Iberian Peninsula with cold-adapted trees that currently share high-altitude environments in this region.
Authors
Linn Vassvik Anders Nielsen Erik Trond Aschehoug Bjørn Arild Hatteland Joseph Chipperfield Michael P. D. GarrattAbstract
No abstract has been registered
Authors
Arne Verstraeten Nicolas Bruffaerts Fabiana Cristofolini Elena Vanguelova Johan Neirynck Gerrit Genouw Bruno De Vos Peter Waldner Anne Thimonier Anita Nussbaumer Mathias Neumann Sue Benham Pasi Rautio Liisa Ukonmaanaho Päivi Merilä Antti-Jussi Lindroos Annika Saarto Jukka Reiniharju Nicholas Clarke Volkmar Timmermann Manuel Nicolas Maria Schmitt Katrin Meusburger Anna Kowalska Idalia Kasprzyk Katarzyna Kluska Łukasz Grewling Małgorzata Malkiewicz Lars Vesterdal Morten Ingerslev Miklós Manninger Donat Magyar Hugues Titeux Gunilla Pihl Karlsson Regula Gehrig Sandy Adriaenssens Agneta Ekebom Åslög Dahl Marco Ferretti Elena GottardiniAbstract
The effects of tree pollen on precipitation chemistry are not fully understood and this can lead to misinterpretations of element deposition in European forests. We investigated the relationship between forest throughfall (TF) element fluxes and the Seasonal Pollen Integral (SPIn) using linear mixed-effects modelling (LME). TF was measured in 1990–2018 during the main pollen season (MPS, arbitrary two months) in 61 managed, mostly pure, even-aged Fagus, Quercus, Pinus, and Picea stands which are part of the ICP Forests Level II network. The SPIn for the dominant tree genus was observed at 56 aerobiological monitoring stations in nearby cities. The net contribution of pollen was estimated as the TF flux in the MPS minus the fluxes in the preceding and succeeding months. In stands of Fagus and Picea, two genera that do not form large amounts of flowers every year, TF fluxes of potassium (K+), ammonium-nitrogen (NH4+-N), dissolved organic carbon (DOC), and dissolved organic nitrogen (DON) showed a positive relationship with SPIn. However- for Fagus- a negative relationship was found between TF nitrate-nitrogen (NO3−-N) fluxes and SPIn. For Quercus and Pinus, two genera producing many flowers each year, SPIn displayed limited variability and no clear association with TF element fluxes. Overall, pollen contributed on average 4.1–10.6% of the annual TF fluxes of K+ > DOC > DON > NH4+-N with the highest contribution in Quercus > Fagus > Pinus > Picea stands. Tree pollen appears to affect TF inorganic nitrogen fluxes both qualitatively and quantitatively, acting as a source of NH4+-N and a sink of NO3−-N. Pollen appears to play a more complex role in nutrient cycling than previously thought.
Authors
Gry Alfredsen Lone Ross Michael Altgen Igor A. Yakovlev Anne-Cathrine Flyen Mari sand Austigaard Johan Mattsson Nanna Bjerregaard PedersenAbstract
No abstract has been registered
Authors
Gry Alfredsen Lone Ross Michael Altgen Igor A. Yakovlev Anne-Cathrine Flyen Mari sand Austigaard Johan Mattsson Nanna Bjerregaard PedersenAbstract
No abstract has been registered
Authors
Gry Alfredsen Lone Ross Michael Altgen Igor A. Yakovlev Anne-Cathrine Flyen Mari sand Austigaard Johan Mattsson Nanna Bjerregaard PedersenAbstract
No abstract has been registered
Abstract
Temperature and humidity were measured in 28 vegetable stores and corelated to quality of stored vegetable through two storage seasons. The vegetables swede, carrot and celeriac were grown at one site within each of the four regions in Norway ROG, MID, INN and OSL, respectively. After harvesting, the vegetables were weighed and visually assessed for any injuries or diseases and stored in different stores within the same region as grown. Four bags dug down in four storage bins in each store. Temperature and humidity were logged in each bag as well as on the top of each bin and on wall of the storage. In general, we found significant differences in the storage quality between the different storages as well as between regions. Correlating data on quality with temperature data shows for carrot a tendency to an increase in the proportion of fresh roots and reduction in incidence of tip-rot by an increased average temperature during the first two weeks of storage. This corresponds to results from tested various wound healing treatments. An increase in accumulated temperature during the storage period showed a tendency to increase the emergence of tip-rot and reduce the proportion of fresh roots. For celeriac, the effect of temperature varied between years, possibly due to a large difference in quality in the two test years, and it was difficult to draw any conclusion. In swede, the results suggest that a decrease in temperature in the first two weeks of storage increased the risk of the symptom shown as black veins in the phloem. Nutrient status was found to be a possibly predisposing factor for reduced storage quality in celeriac. Balance of boron (B) to calcium (Ca) and zinc (Zn) were studied in two sites. Highest incidence of brown spots and lowest proportion of fresh roots following storage was found in celeriac with the lowest Ca/B ratio in leaves, lowest content of Zn in the leaves and roots and lowest soil pH.
Abstract
Pandora neoaphidis is a common entomopathogenic fungus on Sitobion avenae, which is an important aphid pest on cereals in Europe. Pandora neoaphidis is known to cause epizootics (i.e. an unusually high prevalence of infected hosts) and the rapid collapse of aphid populations. We developed a weather-driven mechanistic model of the winter wheat-S. avenae-P. neoaphidis system to simulate the dynamics from spring to harvest. Aphid immigration was fixed at a rate that would lead to a pest outbreak, if not controlled by the fungus. We estimated the biocontrol efficacy by running pair-wise simulations, one with and one without the fungus. Uncertainty in model parameters and variation in weather was included, resulting in a range of simulation outcomes, and a global sensitivity analysis was performed. We identified two key understudied parameters that require more extensive experimental data collection to better assess the fungus biocontrol, namely the fungus transmission efficiency and the decay of cadaver, which defines the time window for possible disease transmission. The parameters with the largest influence on the improvement in yield were the weather, the lethal time of exposed aphids, the fungus transmission efficiency, and the humidity threshold for fungus development, while the fungus inoculum in the chosen range (between 10 and 70% of immigrant aphids carrying the fungus) was less influential. The model suggests that epizootics occurring early, around Zadoks growth stage (GS) 61, would lead to successful biocontrol, while later epizootics (GS 73) were a necessary but insufficient condition for success. These model predictions were based on the prevalence of cadavers only, not of exposed (i.e. infected but yet non-symptomatic) aphids, which in practice would be costly to monitor. The model suggests that practical Integrated Pest Management could thus benefit from including the cadavers prevalence in a monitoring program. We argue for further research to experimentally estimate these cadaver thresholds.
Abstract
Pandora neoaphidis is a common entomopathogenic fungus on Sitobion avenae, which is an important aphid pest on cereals in Europe. Pandora neoaphidis is known to cause epizootics (i.e. an unusually high prevalence of infected hosts) and the rapid collapse of aphid populations. We developed a weather-driven mechanistic model of the winter wheat-S. avenae-P. neoaphidis system to simulate the dynamics from spring to harvest. Aphid immigration was fixed at a rate that would lead to a pest outbreak, if not controlled by the fungus. We estimated the biocontrol efficacy by running pair-wise simulations, one with and one without the fungus. Uncertainty in model parameters and variation in weather was included, resulting in a range of simulation outcomes, and a global sensitivity analysis was performed. We identified two key understudied parameters that require more extensive experimental data collection to better assess the fungus biocontrol, namely the fungus transmission efficiency and the decay of cadaver, which defines the time window for possible disease transmission. The parameters with the largest influence on the improvement in yield were the weather, the lethal time of exposed aphids, the fungus transmission efficiency, and the humidity threshold for fungus development, while the fungus inoculum in the chosen range (between 10 and 70% of immigrant aphids carrying the fungus) was less influential. The model suggests that epizootics occurring early, around Zadoks growth stage (GS) 61, would lead to successful biocontrol, while later epizootics (GS 73) were a necessary but insufficient condition for success. These model predictions were based on the prevalence of cadavers only, not of exposed (i.e. infected but yet non-symptomatic) aphids, which in practice would be costly to monitor. The model suggests that practical Integrated Pest Management could thus benefit from including the cadavers prevalence in a monitoring program. We argue for further research to experimentally estimate these cadaver thresholds.