Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2020
Abstract
Identification of stocktype attributes that speed up field establishment has potential to reduce rotation time of Christmas tree productions. Such morphological and physiological attributes can be targeted in the nursery production. This study tested the effects of container type and nursery seedling density on stocktype attributes at planting and the effects of these on field performance over two years in Abies lasiocarpa and A. nordmanniana Christmas tree stock. Nursery conditions had a considerable impact on seedling attributes at planting. Although sets of these correlated stocktype attributes contributed to forecast field performance, the predictive power was low. No simple relationships were found between plant biomass, stem diameter or height at planting and biomass at final harvest in either of the two species under the range of stocktype variation and field conditions tested. Contrary, stem diameter and stem height at planting explained some of the responses in stem diameter and height after two years in the field. Thus, any target seedling approach would have to be based on a combined set of stocktype attributes exploring more productive stocktypes. The differences observed between stocktypes were largely due to size differences and ontogenetic drift, and stocktypes converged towards a similar field phenotype over time.
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Editors
Sekhar Udaya NagothuAbstract
This book examines the bioeconomy concept, analysing the opportunities it can generate, the constraints and the potential benefits for society. The main objective of bioeconomy is to promote economic development, by creating jobs and enhancing the sustainable utilization of bio-resources. A primary driver of bioeconomy strategy, therefore, is the need to respond to the growing population's food and economic requirements. While today research and literature related to bioeconomy are limited, this book presents a unique collection of perspectives on the complex dimensions of the bioeconomy debate. Drawing on the experiences from Europe, Asia and Africa, it presents an international overview. The chapters address a wide range of issues, including coastal-land interactions, ecosystem services, food production, rural development, agriculture, forest management and bioenergy. As a whole, the volume outlines what role bioeconomy can play in contributing to the United Nations Sustainable Development Goals (SDGs) without compromising on the ecological sustainability and equitable distribution of benefits. The book concludes by providing recommendations for developing bioeconomy in respective sectors (agriculture, forestry, fisheries, renewable energy) and directions for planning future bioeconomy programmes and strategies. The Bioeconomy Approach will be of great interest to students and scholars of ecological economics, development economics and environmental economics, as well as policy-makers and practitioners involved in sustainable development.
Abstract
Knowledge about population genetic structure and dispersal capabilities is important for the development of targeted management strategies for agricultural pest species. The apple fruit moth, Argyresthia conjugella (Lepidoptera, Yponomeutidae), is a pre-dispersal seed predator. Larvae feed on rowanberries (Sorbus aucuparia), and when rowanberry seed production is low (i.e., inter-masting), the moth switches from laying eggs in rowanberries to apples (Malus domestica), resulting in devastating losses in apple crops. Using genetic methods, we investigated if this small moth expresses any local genetic structure, or alternatively if gene flow may be high within the Scandinavian Peninsula (~850.000 km2, 55o - 69o N). Genetic diversity was found to be high (n = 669, mean He = 0.71). For three out of ten tetranucleotide STRs, we detected heterozygote deficiency caused by null alleles, but tests showed little impact on the overall results. Genetic differentiation between the 28 sampling locations was very low (average FST = 0.016, P < 0.000). Surprisingly, we found that all individuals could be assigned to one of two non-geographic genetic clusters, and that a third, geographic cluster was found to be associated with 30% of the sampling locations, with weak but significant signals of isolation-by-distance. Conclusively, our findings suggest wind-aided dispersal and spatial synchrony of both sexes of the apple fruit moth over large areas and across very different climatic zones. We speculate that the species may recently have had two separate genetic origins caused by a genetic bottleneck after inter-masting, followed by rapid dispersal and homogenization of the gene pool across the landscape. We suggest further investigations of spatial genetic similarities and differences of the apple fruit moth at larger geographical scales, through life-stages, across inter-masting, and during attacks by the parasitoid wasp (Microgaster politus).
Authors
Pia Heltoft Thomsen Bjarni Hannesson Karin Normann Per Sørensen Tania Gneist Michelle DaCosta Eric Watkins Karin Juul Hesselsøe Trygve S. Aamlid Tatsiana Espevig Trond Olav Pettersen Wendy Marie Waalen Jan TangsveenAbstract
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Authors
Jiangsan Zhao Dmitry Kechasov Boris Rewald Gernot Bodner Michel Verheul Nicholas Clarke Jihong Liu ClarkeAbstract
Hyperspectral imaging has many applications. However, the high device costs and low hyperspectral image resolution are major obstacles limiting its wider application in agriculture and other fields. Hyperspectral image reconstruction from a single RGB image fully addresses these two problems. The robust HSCNN-R model with mean relative absolute error loss function and evaluated by the Mean Relative Absolute Error metric was selected through permutation tests from models with combinations of loss functions and evaluation metrics, using tomato as a case study. Hyperspectral images were subsequently reconstructed from single tomato RGB images taken by a smartphone camera. The reconstructed images were used to predict tomato quality properties such as the ratio of soluble solid content to total titratable acidity and normalized anthocyanin index. Both predicted parameters showed very good agreement with corresponding “ground truth” values and high significance in an F test. This study showed the suitability of hyperspectral image reconstruction from single RGB images for fruit quality control purposes, underpinning the potential of the technology—recovering hyperspectral properties in high resolution—for real-world, real time monitoring applications in agriculture any beyond.
Abstract
Endogenous antimicrobial peptides (AMPs) are evolutionarily ancient factors of innate immunity, which are produced by all multicellular organisms and play a key role in their protection against infection. Red king crab (Paralithodes camtschaticus), also called Kamchatka crab, is widely distributed and the best known species of all king crabs belonging to the family Lithodidae. Despite their economic importance, the genetic resources of king crabs are scarcely known and no fullgenome sequences are available to date. Therefore, analysis of the red king crab transcriptome and identifcation and characterization of its AMPs could potentially contribute to the development of novel antimicrobial drug candidates when antibiotic resistance has become a global health threat. In this study, we sequenced the P. camtschaticus transcriptomes from carapace, tail fap and leg tissues using an Illumina NGS platform. Libraries were systematically analyzed for gene expression profles along with AMP prediction. By an in silico approach using public databases we defned 49 cDNAs encoding for AMP candidates belonging to diverse families and functional classes, including buforins, crustins, paralithocins, and ALFs (anti-lipopolysaccharide factors). We analyzed expression patterns of 27 AMP genes. The highest expression was found for Paralithocin 1 and Crustin 3, with more than 8,000 reads. Other paralithocins, ALFs, crustins and ubiquicidins were among medium expressed genes. This transcriptome data set and AMPs provide a solid baseline for further functional analysis in P. camtschaticus. Results from the current study contribute also to the future application of red king crab as a bio-resource in addition to its being a known seafood delicacy.