Publications
NIBIOs employees contribute to several hundred scientific articles and research reports every year. You can browse or search in our collection which contains references and links to these publications as well as other research and dissemination activities. The collection is continously updated with new and historical material.
2017
Authors
Nina Trandem Arne Stensvand Joséphine Rehnfeldt Karin Westrum Dan H. Christensen Aksel Døving Jan Karstein HenriksenAbstract
No abstract has been registered
2016
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No abstract has been registered
Abstract
No abstract has been registered
Authors
Ari Hietala Hugh Cross Halvor Solheim Volkmar Timmermann Nina Elisabeth Nagy Isabella Børja Adam Vivian-Smith Jørn Henrik SønstebøAbstract
No abstract has been registered
Authors
Hugh Cross Jørn Henrik Sønstebø Nina Elisabeth Nagy Volkmar Timmermann Halvor Solheim Isabella Børja Håvard Kauserud Tor Carlsen Barbara Rzepka Katarzyna Wasak Adam Vivian-Smith Ari HietalaAbstract
High biodiversity is regarded as a barrier against biological invasions. We hypothesized that the invasion success of the pathogenic ascomycete Hymenoscyphus fraxineus threatening common ash in Europe relates to differences in dispersal and colonization success between the invader and the diverse native competitors. Ash leaf mycobiome was monitored by high-throughput sequencing of the fungal internal transcribed spacer region (ITS) and quantitative PCR profiling of H. fraxineus DNA. Initiation of ascospore production by H. fraxineus after overwintering was followed by pathogen accumulation in asymptomatic leaves. The induction of necrotic leaf lesions coincided with escalation of H. fraxineus DNA levels and changes in proportion of biotrophs, followed by an increase of ubiquitous endophytes with pathogenic potential. H. fraxineus uses high propagule pressure to establish in leaves as quiescent thalli that switch to pathogenic mode once these thalli reach a certain threshold – the massive feedback from the saprophytic phase enables this fungus to challenge host defenses and the resident competitors in mid-season when their density in host tissues is still low. Despite the general correspondence between the ITS-1 and ITS-2 datasets, marker biases were observed, which suggests that multiple barcodes provide better overall representation of mycobiomes.
Authors
Ingerd Skow Hofgaard Till Seehusen Heidi Udnes Aamot Hugh Riley Jafar Razzaghian Vinh Hong Le Anne-Grete Roer Hjelkrem Ruth Dill-Macky Guro BrodalAbstract
No abstract has been registered
Authors
Heidi Udnes Aamot Ingeborg Klingen SG Edwards May Bente Brurberg Guro Brodal Toril Eklo Hege Særvold Steen Jafar Razzaghian Elisa B. Gauslå Ingerd Skow HofgaardAbstract
The plant pathogenic fungus Fusarium langsethiae produces the highly potent mycotoxins HT-2 and T-2. Since these toxins are frequently detected at high levels in oat grain lots, they pose a considerable risk for food and feed safety in Norway, as well as in other north European countries. To reduce the risk of HT-2/T- 2-contaminated grain lots to enter the food and feed chain, it is important to identify factors that influence F. langsethiae infection and mycotoxin development in oats. However, the epidemiology of F. langsethiae is unclear. A three-year survey was performed to reveal more of the life cycle of F. langsethiae and its interactions with oats, other Fusarium species, as well as insects, mites and weeds. We searched for inoculum sources by quantifying the amount of F. langsethiae DNA in weeds, crop residues, and soil, sampled from a predetermined selection of oat-fields. To be able to define the onset of infection, we analysed the amount of F. langsethiae DNA in oat plant material sampled at selected growth stages (between booting and maturation), as well as the amount of F. langsethiae DNA and HT-2 and T-2 toxins in the mature grain. We also studied the presence of possible insect- and mite vectors sampled at the selected growth stages using Berlese funnel traps. All the different types of materials were also analysed for the presence F. graminearum DNA, the most important deoxynivalenol producer observed in Norwegian cereals, and which presence has shown a striking lack of correlation with the presence F. langsethiae in oat. Preliminary results show that F. langsethiae DNA may occur in the oat plant before heading and flowering. Some F. langsethiae DNA was observed in crop residues and weeds, though at relatively low levels. More results from this work will be presented at the meeting.
Authors
Heidi Udnes Aamot Ingeborg Klingen S.G. Edwards May Bente Brurberg Guro Brodal Toril Eklo Hege Særvold Steen Jafar Razzaghian Elisa B. Gauslå Ingerd Skow HofgaardAbstract
The plant pathogenic fungus Fusarium langsethiae produces the highly potent mycotoxins HT-2 and T-2. Since these toxins are frequently detected at high levels in oat grain lots, they pose a considerable risk for food and feed safety in Norway, as well as in other north European countries. To reduce the risk of HT-2/T- 2-contaminated grain lots to enter the food and feed chain, it is important to identify factors that influence F. langsethiae infection and mycotoxin development in oats. However, the epidemiology of F. langsethiae is unclear. A three-year survey was performed to reveal more of the life cycle of F. langsethiae and its interactions with oats, other Fusarium species, as well as insects, mites and weeds. We searched for inoculum sources by quantifying the amount of F. langsethiae DNA in weeds, crop residues, and soil, sampled from a predetermined selection of oat-fields. To be able to define the onset of infection, we analysed the amount of F. langsethiae DNA in oat plant material sampled at selected growth stages (between booting and maturation), as well as the amount of F. langsethiae DNA and HT-2 and T-2 toxins in the mature grain. We also studied the presence of possible insect- and mite vectors sampled at the selected growth stages using Berlese funnel traps. All the different types of materials were also analysed for the presence F. graminearum DNA, the most important deoxynivalenol producer observed in Norwegian cereals, and which presence has shown a striking lack of correlation with the presence F. langsethiae in oat. Preliminary results show that F. langsethiae DNA may occur in the oat plant before heading and flowering. Some F. langsethiae DNA was observed in crop residues and weeds, though at relatively low levels. More results from this work will be presented at the meeting.
Authors
Ingerd Skow Hofgaard Heidi Udnes Aamot Torfinn Torp M. Jestoi V.M.T. Lattanzio Sonja Klemsdal C. Waalwijk T. van der Lee Guro BrodalAbstract
During the last ten years, Norwegian cereal grain industry has experienced large challenges due to Fusarium spp. and Fusarium mycotoxin contamination of small-grained cereals. To prevent severely contaminated grain lots from entering the grain supply chain, it is important to establish surveys for the most prevalent Fusarium spp. and mycotoxins. The objective of our study was to quantify and calculate the associations between Fusarium spp. and mycotoxins prevalent in oats and spring wheat. In a 6-year period from 2004-2009, 178 grain samples of spring wheat and 289 samples of oats were collected from farmers’ fields in South East Norway. The grains were analysed for 18 different Fusarium-mycotoxins by liquid chromatography – mass spectrometry. Generally, the median mycotoxin levels were higher than reported in Norwegian studies covering previous years. The DNA content of Fusarium graminearum, Fusarium culmorum, Fusarium langsethiae, Fusarium poae and Fusarium avenaceum were determined by quantitative PCR. We identified F. graminearum as the main deoxynivalenol (DON) producer in oats and spring wheat, and F. langsethiae as the main HT-2 and T-2-toxins producer in oats. No association was observed between quantity of F. graminearum DNA and quantity of F. langsethiae DNA nor for their respective mycotoxins, in oats. F. avenaceum was one of the most prevalent Fusarium species in both oats and spring wheat. The following ranking of Fusarium species was made based on the DNA concentrations of the Fusarium spp. analysed in this survey (from high to low): F. graminearum = F. langsethiae = F. avenaceum > F. poae > F. culmorum (oats); F. graminearum = F. avenaceum > F. culmorum > F. poae = F. langsethiae (spring wheat). Our results are in agreement with recently published data indicating a shift in the relative prevalence of Fusarium species towards more F. graminearum versus F. culmorum in Norwegian oats and spring wheat.
Authors
Ingerd Skow Hofgaard Shiori Koga Heidi Udnes Aamot Ulrike Böcker Erik Lysøe Guro Brodal Ruth Dill-Macky Anne Kjersti UhlenAbstract
The proportion of Norwegian wheat used for food has recently been dramatically lower due to both reduced production and poor quality. Furthermore, the Norwegian milling and baking industries have experienced major challenges in utilizing Norwegian wheat due to the instability of factors, such as protein content and gluten functionality, that are of major importance for baking quality. The variation in the wheat quality can itself cause economic losses for the milling and baking industry due to uncertainty in the marketplace. In the same period as a large variation in baking quality was reported in Norwegian wheat, serious contamination of Fusarium spp. and mycotoxins were observed in some grain lots. We have revealed the severe degradation of gluten proteins in some Norwegian wheat samples leading to an almost complete loss in the gluten functionality. The degradation of the gluten appears to be caused by exogenous proteases, and was associated with the presence of Fusarium spp., and their metabolites, and other microorganisms in the wheat. Increased knowledge is needed to establish the cause of the poor gluten functionality and to develop control measures to reduce the amount of poor quality wheat entering the food value chain. In 2014, a new project was established to generate deeper knowledge in the interface between gluten functionality and effects of Fusarium spp. and other microorganism on wheat quality, and to better utilize Norwegian wheat grown in this challenging environment. A metagenomic analysis, designed to identify microorganisms associated with reduced baking quality, has been undertaken. To study the influence of the identified microorganisms and their metabolites on gluten functionality, wheat plants were inoculated with microorganisms, selected based upon the results of the metagenomics study. Fusarium species are among those microorganisms being tested.